Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq23 122 6e-23
>seq23
Length=690853
Score = 122 bits (134), Expect = 6e-23
Identities = 291/440 (66%), Gaps = 0/440 (0%)
Strand=Plus/Plus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
||||| |||| ||||| ||||| || || || | || ||||| || || || ||||
Sbjct 88792 CGTCTTGTGGCTTTTGCTGCTGTCGAGGGAATCTTTTTCTCTGGCTCGTTCGCCTCCATC 88851
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|| ||||| ||||| ||| |||||||| || | | ||| ||| ||| | ||
Sbjct 88852 TTTTGGCTCAAGAAGCGTGGTCTCATGCCGGGACTCACCTTTAGCAATGAGCTCATCTCT 88911
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920
|||||||| ||||| ||| || || || ||| | ||||||| || || |||||
Sbjct 88912 CGTGACGAGGGTCTCCACACAGATTTCGCCTGTCTCTTGTTTAGTCACTTGAAGAACAAG 88971
Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980
|| | || | | | ||| | ||||| |||| || ||||| |||||| |||||||
Sbjct 88972 CCTTCAAAGCAACAGGTACAAGACATCATTACTGAAGCTGTTGAGATTGAGCAGGCTTTC 89031
Query 22981 TTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTAC 23040
|| ||| | ||| ||| || | ||||| ||| | ||| | ||||
Sbjct 89032 CTCACAGACTCCCTACCATGCCCCTTATTGGGTATCAATGCAAAGCTCATGCGCGAGTAC 89091
Query 23041 ATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTT 23100
|| | ||||| || ||||| || |||| | || || | |||| | ||| ||
Sbjct 89092 ATTGAATTTGTCGCTGATCGACTCCTCGTCTCTCTTGGCAACAAAAAGTTCTATCACACC 89151
Query 23101 GCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160
|||||||||||| || ||||| |||||| | | || || || |||||||||||
Sbjct 89152 AGCAATCCATTTGACTTTATGGAGAACATTTCACTCGCTGGCAAGACCAACTTCTTTGAG 89211
Query 23161 CGCCGTGTGAGTGAATATCA 23180
||||| |||| || ||
Sbjct 89212 AAGCGTGTCGGTGACTACCA 89231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233408969732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |