Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq23 122 6e-23 >seq23 Length=690853 Score = 122 bits (134), Expect = 6e-23 Identities = 291/440 (66%), Gaps = 0/440 (0%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| |||| ||||| ||||| || || || | || ||||| || || || |||| Sbjct 88792 CGTCTTGTGGCTTTTGCTGCTGTCGAGGGAATCTTTTTCTCTGGCTCGTTCGCCTCCATC 88851 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 || ||||| ||||| ||| |||||||| || | | ||| ||| ||| | || Sbjct 88852 TTTTGGCTCAAGAAGCGTGGTCTCATGCCGGGACTCACCTTTAGCAATGAGCTCATCTCT 88911 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920 |||||||| ||||| ||| || || || ||| | ||||||| || || ||||| Sbjct 88912 CGTGACGAGGGTCTCCACACAGATTTCGCCTGTCTCTTGTTTAGTCACTTGAAGAACAAG 88971 Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980 || | || | | | ||| | ||||| |||| || ||||| |||||| ||||||| Sbjct 88972 CCTTCAAAGCAACAGGTACAAGACATCATTACTGAAGCTGTTGAGATTGAGCAGGCTTTC 89031 Query 22981 TTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTAC 23040 || ||| | ||| ||| || | ||||| ||| | ||| | |||| Sbjct 89032 CTCACAGACTCCCTACCATGCCCCTTATTGGGTATCAATGCAAAGCTCATGCGCGAGTAC 89091 Query 23041 ATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTT 23100 || | ||||| || ||||| || |||| | || || | |||| | ||| || Sbjct 89092 ATTGAATTTGTCGCTGATCGACTCCTCGTCTCTCTTGGCAACAAAAAGTTCTATCACACC 89151 Query 23101 GCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160 |||||||||||| || ||||| |||||| | | || || || ||||||||||| Sbjct 89152 AGCAATCCATTTGACTTTATGGAGAACATTTCACTCGCTGGCAAGACCAACTTCTTTGAG 89211 Query 23161 CGCCGTGTGAGTGAATATCA 23180 ||||| |||| || || Sbjct 89212 AAGCGTGTCGGTGACTACCA 89231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233408969732