Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq23 82.4 7e-11 >seq23 Length=690853 Score = 82.4 bits (90), Expect = 7e-11 Identities = 196/296 (66%), Gaps = 3/296 (1%) Strand=Plus/Minus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 |||||||||||||| || | | || | || ||||| ||||||||| ||||| Sbjct 88673 ATGTATGTATCAATGAGGAGGGAGTAGGTCTCTGAGTGGATGTTTTCCGCCATGATCTGG 88614 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 || ||||| ||||||| || || | ||| ||||| | | || | ||| |||| Sbjct 88613 AAGCCATAGAAGCATCGTGCCTCTGGTACTTGGACTTCGTTGGAGAAACGCTCGAGCAAA 88554 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321 |||||||| || || |||||||| || ||||| || || | | || || ||| | Sbjct 88553 TTTTCATTGACAATGCCATCACTGGCGGCAAAGAAAGCGAGGACGTGGGAGATGAAGAAG 88494 Query 14322 TGCTCTTCATTGTTGAGTTTTTT---CCAATCGGATAAATCCTTAGAAAGATCTACTTCA 14378 | || || | |||||| || || ||| ||| | ||||| || || || | || Sbjct 88493 CGTTCGTCGTCGTTGAGCTTGTTCTCCCAGTCGTGCAGGTCCTTGGAGAGGTCAATCTCC 88434 Query 14379 TCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATA 14434 || | ||||| || || | || ||||| |||||| ||| || || | ||| Sbjct 88433 TCGGCGGTCCAGAAGGATGCTTCTGCCTTTTTGTACATTTGCCAAATCTCGTGATA 88378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727736149600