Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq23 82.4 7e-11
>seq23
Length=690853
Score = 82.4 bits (90), Expect = 7e-11
Identities = 196/296 (66%), Gaps = 3/296 (1%)
Strand=Plus/Minus
Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201
|||||||||||||| || | | || | || ||||| ||||||||| |||||
Sbjct 88673 ATGTATGTATCAATGAGGAGGGAGTAGGTCTCTGAGTGGATGTTTTCCGCCATGATCTGG 88614
Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261
|| ||||| ||||||| || || | ||| ||||| | | || | ||| ||||
Sbjct 88613 AAGCCATAGAAGCATCGTGCCTCTGGTACTTGGACTTCGTTGGAGAAACGCTCGAGCAAA 88554
Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321
|||||||| || || |||||||| || ||||| || || | | || || ||| |
Sbjct 88553 TTTTCATTGACAATGCCATCACTGGCGGCAAAGAAAGCGAGGACGTGGGAGATGAAGAAG 88494
Query 14322 TGCTCTTCATTGTTGAGTTTTTT---CCAATCGGATAAATCCTTAGAAAGATCTACTTCA 14378
| || || | |||||| || || ||| ||| | ||||| || || || | ||
Sbjct 88493 CGTTCGTCGTCGTTGAGCTTGTTCTCCCAGTCGTGCAGGTCCTTGGAGAGGTCAATCTCC 88434
Query 14379 TCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATA 14434
|| | ||||| || || | || ||||| |||||| ||| || || | |||
Sbjct 88433 TCGGCGGTCCAGAAGGATGCTTCTGCCTTTTTGTACATTTGCCAAATCTCGTGATA 88378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727736149600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |