Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq6 107 2e-18
>seq6
Length=440545
Score = 107 bits (118), Expect = 2e-18
Identities = 220/325 (68%), Gaps = 14/325 (4%)
Strand=Plus/Minus
Query 164605 AAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTT 164664
||||| ||||||||||||||| | | ||||| | ||| ||| | ||||| | ||| |
Sbjct 174822 AAAATCGTTAATGGTCCTGAAATCCTCAACAAGTTTGTGGGTCAATCAGAGGAGAATATC 174763
Query 164665 AGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGAAAGCAGGTTTA-GCTAGTAAATT 164723
|| ||| | ||| || || ||| | || | ||| | | ||| | | | ||| ||
Sbjct 174762 AGGAAGCTCTTTGCAGATGCGGAAAAGGAGTACAAGGA-GAAGGGTGACGAGAGTTCGTT 174704
Query 164724 ACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGGTGATAATATTAT 164783
||| | ||| | ||||||||| | ||||| |||||||| | ||||| || |
Sbjct 174703 ACACATCATTATCTTTGATGAGCTCGATGCAATTTGCAAACAGCGTGGATCTACAGGTGG 174644
Query 164784 T--CA----------TGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGA 164831
| || ||| | ||||| |||||| |||| || ||||| |||||||| ||
Sbjct 174643 TGGCACGGGTGTCGGTGACTCGGTGGTCAATCAGCTGCTCTCCAAAATGGATGGTGTCGA 174584
Query 164832 ATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGC 164891
| || ||||| | ||| | |||||||||||||||| || | ||||| || ||
Sbjct 174583 CCAACTCAACAATATCCTCATTATTGGTATGACCAACCGACTAGACATGATTGACGAAGC 174524
Query 164892 TTTATTACGACCTGGTCGATTAGAA 164916
| ||||||| |||||||| |||
Sbjct 174523 CCTGCTACGACCAGGTCGATTGGAA 174499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871672270400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |