Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq43 127 2e-24
>seq43
Length=605699
Score = 127 bits (140), Expect = 2e-24
Identities = 169/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||||| |||||| | | ||||||||||||||||| || || ||||| || | ||| |
Sbjct 450416 TTTACTGTCCTCCACGAAGACGCAACACCAAGTGCAATGTTGACTCCTTCTGAATGTTGT 450475
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| ||| || |||| |||||| ||||| ||||| ||||||| | | ||||| |
Sbjct 450476 AGTCGGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGT 450535
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
| || ||||||||||| ||||| | ||| || ||||||| | | | ||||| |
Sbjct 450536 CAGGTGGAATACCTTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGATG 450595
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | |||||||| |||||||| ||||| || || || || |||||
Sbjct 450596 ACTCTACCTCGAGTGTGATGGTCTTTCCAGTCAGAGTCTTGACGAAAATTTGCAT 450650
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| || ||||| || | || || ||| || |||| |||||| ||||| || ||
Sbjct 451138 GTTGACTCCTTCTGAATATTGTAGTCGGCCAAAGTGCGACCATCCTCAAGCTGCTTGCCA 451197
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
|||| || | | |||||||| || ||||| || || ||||| | ||| || ||||
Sbjct 451198 GCAAAAATGAGACGCTGCTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTG 451257
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
|| | | | ||||| | || || || | |||||||| ||||||||||||||
Sbjct 451258 ACATTGTCAATGGTGTCTGATGACTCAACCTCGAGTGTGATGGTCTTTCCAGTAAGAGTC 451317
Query 94991 TTCACAAAGATCTGCAT 95007
|| ||||||||||||||
Sbjct 451318 TTGACAAAGATCTGCAT 451334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290953439840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |