Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq41 179 6e-41
seq3 179 6e-41
>seq41
Length=616673
Score = 179 bits (198), Expect = 6e-41
Identities = 200/267 (75%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| |||| | ||| || || |||||||| || ||||||||||| || |||
Sbjct 347134 GCAAAGCGTCACCGCAAAATTCTGCGTGACAACATCCAGGGTATCACCAAGCCTGCAATC 347193
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||| ||||||||||| || ||||||||| |||| || | |||| || ||||
Sbjct 347194 CGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGACA 347253
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| | |||| ||||||| || || || | |||||| || ||| || |||
Sbjct 347254 CGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATTCGTGATGCAGTCACCTACACTGAG 347313
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| |||||||| | ||| | |||||||| ||||| | || |||
Sbjct 347314 CACGCCAAGCGCAAGACCGTCACCTCGCTCGATGTTGTCTATGCCTTGAAGAGGCAGGGC 347373
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | || || || || || |||||
Sbjct 347374 CGCACCATCTACGGATTCGGTGGTTAA 347400
>seq3
Length=560494
Score = 179 bits (198), Expect = 6e-41
Identities = 198/261 (76%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| |||| || || || |||||||| || ||||||||||| |||||
Sbjct 501003 GCCAAGCGTCACCGCAAGATC-CTGCGTGACAACATCCAGGGCATCACCAAGCCTGCTAT 501061
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||||| || |||||||| || ||||||||| ||||||| | |||| || ||||
Sbjct 501062 TCGTCGTCTTGCCCGTCGTGGCGGTGTCAAGCGTATCTCTGGTCTCATCTACGAGGAGAC 501121
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | |||| | |||| |||||| || ||| || | ||||| | ||| || ||
Sbjct 501122 ACGCGGTGTTCTCAAGACTTTCCTCGAGGGCGTCATTCGGGATGCAGTTACCTACACAGA 501181
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || |||||||||||||| | ||| | || || ||| | |||||||||||
Sbjct 501182 GCACGCCAAGCGCAAGACTGTCACCTCGCTCGATGTGGTGTACGCACTCAAACGTCAAGG 501241
Query 16672 CCGTAAGATTTATGGTTTTGG 16692
| | | || || ||||| ||
Sbjct 501242 CAGGACCATCTACGGTTTCGG 501262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075159770492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |