Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq43 122 7e-23 >seq43 Length=605699 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | ||| || || || | || || || || ||||||||||| ||| | Sbjct 450424 CCTCCACGAAGACGCAACACCAAGTGCAATGTTGACTCCTTCTGAATGTTGTAGTCGGCC 450483 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| ||| ||| ||||| || || ||||| ||||||||||||| ||||| || ||| Sbjct 450484 AAAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGTGGA 450543 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| |||||| || | | |||| |||||| | || || || Sbjct 450544 ATACCTTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGATGACTCTACC 450603 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || |||||||| || || ||||| ||||| Sbjct 450604 TCGAGTGTGATGGTCTTTCCAGTCAGAGTCTTGACGAAAATTTGCAT 450650 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || || || || ||||| ||||| ||| Sbjct 451105 ATACCACCACGGAGACGGAGGACAAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGTCG 451164 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| ||| ||| ||||| || || ||||| | ||||||||||| || || || Sbjct 451165 GCCAAAGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGATCAGGT 451224 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | |||| |||||| | || || Sbjct 451225 GGAATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCAATGGTGTCTGATGACTCA 451284 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || ||||| || ||||| |||||||| Sbjct 451285 ACCTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 451334 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || ||||| || || ||||| | ||||||||||| ||||| || |||||||| || ||| Sbjct 450724 TCCTCAAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTG 450783 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || |||||| || | | |||| |||||| | |||||||| || | || | Sbjct 450784 TCTTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGATGATTCGACTTCGAGTGTAATG 450843 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || |||| ||| || || ||||||||||| Sbjct 450844 GTCTTTCCAGTCAAAGTCTTAACGAAAATCTGCAT 450878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134174702928