Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq43 316 4e-81
seq23 255 1e-62
>seq43
Length=605699
Score = 316 bits (350), Expect = 4e-81
Identities = 898/1362 (66%), Gaps = 41/1362 (3%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
|||||||||||| ||||| || | || || || ||| ||| | |||||| || ||
Sbjct 34647 GTTCACCACCTGGAACTCACCGGCAAGGACACGACGCGAGTAAATGTTGCTCGTGTAGGG 34588
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||| | || || || ||||| ||||| | |||| |||||| ||||| || | |||
Sbjct 34587 CTCAAAGCATTCATTGAAACCCAGAATCTGTGACGTGGACGCAGTGGGCATCGGTG-CAC 34529
Query 244210 -CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGC-TCGTTCCAGTCC 244267
|| ||| ||| | | || ||| | || | | ||||| ||| |||||||
Sbjct 34528 ACAACAGGGAGTTGCGGATACCATGCTTTGCAATCTGCTCTTTGAGCGTCGC-CCAGTCC 34470
Query 244268 CACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTG 244327
|| | | ||| | || ||| ||||| |||| |||||| || ||||
Sbjct 34469 CAGA-----GCTTGGT----GGGTGTGACATTCCACAAGTCATACTGCAAAAGTCCCTGA 34419
Query 244328 CTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTC 244387
| | || |||||||||||| | ||| ||||| || || ||||||| |||
Sbjct 34418 GAGGCAGGTGAGCCCTCGTAGGTAGAGTATGGACCCTCTTCTTGTGCCAGCTCACACGAG 34359
Query 244388 TCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447
| || || || ||| |||||||||||| ||||| |||||| || ||||| |
Sbjct 34358 GCTTCAAGAGCACCGTGGTAGATGGTCTCAAAGATTTGGATGTTCAGCTCCTTGGCCTCG 34299
Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATG 244507
|| ||| || | | || |||| | ||||| || || ||||| || |
Sbjct 34298 GGCGAGTCGAATGGCAGCTTAAGTGCCAAGAAGGCATCGGCGAGACCTTGCACACCAAGA 34239
Query 244508 CCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCG 244567
|||||||||| ||| ||||||||||| ||| ||||| || ||||| ||||| ||
Sbjct 34238 CCGATGGGTCGGTGACGCTTGTTGGAACGCTCAGCTTCAATGACTGGGTAGTAGTTGACG 34179
Query 244568 TCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAG 244627
||||| | |||||| | |||||| | | | | |||| ||| ||| || |||
Sbjct 34178 TCGATGATCTTGTTCAAGTTGCGAGCAACAACCTTGGCGACATCGTGGAGCTTCTTGAAG 34119
Query 244628 TCGTACTCGTAGGGATCCTCGGCG-ATGGTGATCCTCACAAACTCGTTGAGGGCGACGCT 244686
||||| || | | | || ||| ||| ||| || | | ||| | |
Sbjct 34118 TCGTAGACGG-GTGTTTCTGCGCGCATGTCGATG------AAGGTGGGCAAGGCAATGGA 34066
Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746
||| || |||||||| |||||||| || | | ||||| |||||||||||| || |
Sbjct 34065 GGCGAGATTGCAGACAGCCACCTCATCGGGTGCCGAGTACTCGACAATCTCGGTACACAA 34006
Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806
||| |||||||||||||| || |||| || || || |||||| |||||||||||||||
Sbjct 34005 GTTGCTGCACTTGATGGTACCGAGGTTCTTCTGGTTCGACTTGCGGTTGCAGGCGTCCTT 33946
Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866
||| ||||||||||| || ||||| || || |||| | || ||| || |
Sbjct 33945 GTACAGCATGAAGGGATTGCCCGTCTCAGTTTGCGCCTCGAGAATAGCGTACCACAGCTT 33886
Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926
| ||||||| ||| | ||||||| | |||||| |||||||| ||| ||
Sbjct 33885 CTGTGCCTTGATGGTCTTCATGACCTTGCCGGCCTTCTCGTACTTGGTGTACAAGGCTTC 33826
Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTC 244984
|| || ||| | ||||||| | || || || || | ||||||||||| |
Sbjct 33825 AAATTCATCGCCATACACCTCGTGCATACCAGGACATTCGTTG--GGGCACATGAGCGAC 33768
Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044
|||||||| |||| || | || ||||||||| || ||||||||||| || | |||
Sbjct 33767 CACTCGCCATTCTCCTCCACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCATAGAAC 33708
Query 245045 AGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAA 245102
| ||| | || | | | ||| ||| ||| |||||| | || || | ||| |||
Sbjct 33707 AAGTCGC--GTGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCAA 33650
Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162
||| ||| ||||||| ||||| ||||| | ||| | ||| || || ||||||||||| |
Sbjct 33649 AGATGTCTGCGTGCCATGGCTCAATGTAAATAGCAAAGGCACCTGGACGCTTGTTGCCAC 33590
Query 245163 CCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221
| ||||| || ||| | || | |||||||| ||||| | || | ||||||||
Sbjct 33589 CTTGGTCGACATACCTGGC-AGTGTTGTTGAAGACACGCAGCATGGGGATGATGCCGTTG 33531
Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGCCCCTGAGGTTGCTGATGGACAT 245280
|| || || || || ||||| ||| |||| | || ||| | |||||||
Sbjct 33530 GATGTACCATTTGTACCGGCAATGTAACTGCCTGTTGCAC----GGATGCAG-TGGACAT 33476
Query 245281 ----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTA 245336
|| | || ||||| ||| ||||| | ||| || | |||| ||||| |
Sbjct 33475 TGAGACCAATGCCACCGGCTGTCTTAGAGATCATGGCACACGTTTTGAGTGTGTCGTAGA 33416
Query 245337 TGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGG 245396
|||| || || ||| |||||| ||| || ||||| || || || || || ||||
Sbjct 33415 TGCCATCGATCGAGTCATCCTTCATTGTGACAAGGAAGCAAGACGAGAGTTGTGGGTTGG 33356
Query 245397 GGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGT 245438
| | | | |||||| || || || ||||| || ||||
Sbjct 33355 GCGTACCGGCGTTGAAGAGGGTAGGCGATGCGTGTGTGAAGT 33314
>seq23
Length=690853
Score = 255 bits (282), Expect = 1e-62
Identities = 594/878 (68%), Gaps = 36/878 (4%)
Strand=Plus/Plus
Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344
||| || | || || || ||| |||||||| ||||| | ||| ||||||||||
Sbjct 88372 ATCAAGTATCACGAGATTTGGCAAATGTACAAAAAGGCAGAAGCATCCTTCTGGACCGCC 88431
Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGT-CACTGTCTGAGA--ACGAA 42401
|||||||||||||| |||||||| | || ||||||| || || || |||||
Sbjct 88432 GAGGAGATTGACCTCTCCAAGGACCTGCACGACTGGGAGAACAAGCTCAACGACGACGAA 88491
Query 42402 AAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461
|| ||| || || | || || ||||| |||||| ||| ||||| ||||||||
Sbjct 88492 CGCTTCTTCATCTCCCACGTCCTCGCTTTCTTTGCCGCCAGTGATGGCATTGTCAATGAA 88551
Query 42462 AACCTGGCCACCAGGTTCATGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGCTTCTACGG 42520
|| || | | ||| || || || || |||| ||||| || |||||||| ||
Sbjct 88552 AATTTGCTCGAGCGTTTCTCCAACGAAGTCCAAGTACCA-GAGGCACGATGCTTCTATGG 88610
Query 42521 CTTCCAGATAGCCATAGAG---AACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---A 42574
||||||||| ||| | | ||| | ||||| ||| ||| || || |||| |
Sbjct 88611 CTTCCAGAT---CATGGCGGAAAACATCCACTCAGAGACCTACTCC---CTCCTCATTGA 88664
Query 42575 CACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCC 42634
|| |||||| ||| | | | || | || ||| | || || ||||| || ||
Sbjct 88665 TACATACATCAAGGAACAAGCTCAACGGCAGCACCTCTTCGATGCAATCGAGACAATCCC 88724
Query 42635 CTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCG-AGAGTCCCGACG---CAA 42690
||||||||| | || || |||||||| || |||||| | ||| ||||| | |
Sbjct 88725 GTGCATCAAGCAAAAAGCAGACTGGGCACTGCGCTGGATTGCAGA----CGACGAGTCTA 88780
Query 42691 CGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCT 42750
| || | | | || || || ||| | || |||||||| ||||| ||||| ||| | |
Sbjct 88781 CCTTTGCACTGCGTCTTGTGGCTTTTGCTGCTGTCGAGGGAATCTTTTTCTCTGGCTCGT 88840
Query 42751 TCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAAC 42809
||||||||||||| ||||||||| || ||| || ||||| ||||||||||| ||
Sbjct 88841 TCGCCTCCATCTTTTGGCTCAAGAAGCGTGGTCTC-ATGCCGGGACTCACCTTTAGCAAT 88899
Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869
|| |||||| | |||||||| || || | || || ||||| ||| |||| ||
Sbjct 88900 GAGCTCATCTCTCGTGACGAGGGTCTCCACACAGATTTCGCCTGTCTCTTGTT---TAGT 88956
Query 42870 CACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929
||| | | | ||||||| || ||| | | ||| | | |||||| || || || || |||
Sbjct 88957 CACTTGAAGAACAAGCCTTCAAAGCAACAGGTACAAGACATCATTACTGAAGCTGTTGAG 89016
Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCC-TGGTCGGCATGAACCACGA 42988
|| ||| ||| |||||||| | || || || || ||| | | || || || |
Sbjct 89017 ATTGAGCAGGCTTTCCTCACAGACTCCCT-ACCATGCCCCTTATTGGGTATCAATGCAAA 89075
Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAG 43048
|||||| || ||||||| | | ||||| || | ||||| | | || ||
Sbjct 89076 GCTCATGCGCGAGTACATTGAATTTGTCGCTGATCGACTCCTCGTCTCTCTTGGCAACAA 89135
Query 43049 CCGCCTCTACAACAC--GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106
|||| |||| || | || || ||||||||||||||||| || | | |||
Sbjct 89136 AAAGTTCTATCACACCAGCAAT--CCATTTGACTTTATGGAGAACATTTCACTCGCTGGC 89193
Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
||||||||||| || |||||||| |||| ||||||||
Sbjct 89194 AAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTACCA 89231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338680613440
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