Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq43 230 2e-55 >seq43 Length=605699 Score = 230 bits (254), Expect = 2e-55 Identities = 512/767 (67%), Gaps = 1/767 (0%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||||| |||||||| || || || ||||| | || || || ||||| | || Sbjct 33331 CCTACCCTCTTCAACGCCGGTACGCCCAACCCACAACTCTCGTCTTGCTTCCTTGTCACA 33390 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| ||||| ||| || || | ||||| ||||| ||||| | ||||| Sbjct 33391 ATGAAGGATGACTCGATCGATGGCATCTACGACACACTCAAAACGTGTGCCATGATCTCT 33450 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || || || || || || ||| ||||||| | | ||||| | || ||||| Sbjct 33451 AAGACAGCCGGTGGCATTGGTCTCAATGTCCACTGCATCCGTGCAACAGGCAGTTACATT 33510 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 |||||| ||||| || ||||||||| || |||| ||||| || |||||||||||| | Sbjct 33511 GCCGGTACAAATGGTACATCCAACGGCATCATCCCCATGCTGCGTGTCTTCAACAACACT 33570 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || | || || ||||| ||||| | | | ||| | || || | || | ||| Sbjct 33571 GCCAGGTATGTCGACCAAGGTGGCAACAAGCGTCCAGGTGCCTTTGCTATTTACATTGAG 33630 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||||| ||| | | ||| | ||| |||| |||||||||||||| || | Sbjct 33631 CCATGGCACGCAGACATCTTTGGCTTCCTTGACTTGCGCAAGAACCACGGCAAGGAAGAG 33690 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | || | ||| | ||||| ||||||||| | || || || || ||||| || || Sbjct 33691 GTCCGCGCACGCGACTTGTTCTATGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTG 33750 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 ||| | || || ||| || | || ||||| |||||||| || || ||| || Sbjct 33751 GAGGAGAATGGCGAGTGGTCGCTCATGTGCCCCAACGAATGTCCTGGTATGCACGAGGTG 33810 Query 94378 TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAG 94437 | ||| ||||||| |||||| | ||||| | ||||||| || |||| Sbjct 33811 TATGGCGATGAATTTGAAGCCTTGTACACCAAGTACGAGAAGGCCGGCAAGGTCATGAAG 33870 Query 94438 GTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACG 94497 || | || |||||||||| | || | || | || |||||||| | Sbjct 33871 ACCATCAAGGCACAGAAGCTGTGGTACGCTATTCTCGAGGCGCAAACTGAGACGGGCAAT 33930 Query 94498 CCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557 |||| ||| ||| ||||||| | |||| |||||| |||||| || ||||||| Sbjct 33931 CCCTTCATGCTGTACAAGGACGCCTGCAACCGCAAGTCGAACCAGAAGAACCTCGGTACC 33990 Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617 |||||| || || |||| ||||||||||||||||| | | || || ||| | ||| Sbjct 33991 ATCAAGTGCAGCAACTTGTGTACCGAGATTGTCGAGTACTCGGCACCCGATGAGGTGGCT 34050 Query 94618 GTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGC 94664 || || || || | |||||| | || |||| ||| | ||| |||| Sbjct 34051 GTCTGCAATCTCGCCTCCATTGCCTTGCCCACCTTCAT-CGACATGC 34096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722927902240