Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq24 199 3e-45
seq3 114 1e-19
>seq24
Length=98465
Score = 199 bits (220), Expect = 3e-45
Identities = 925/1451 (64%), Gaps = 18/1451 (1%)
Strand=Plus/Plus
Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273
|| ||||| ||| || |||| ||| ||| || |||| ||||| | || ||
Sbjct 56298 TTGGTAATGACAATGTTGTTGGTCTTGCCCGTTCCCTTTTCAGTGGCAGAAATGTTGAGG 56357
Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333
|| |||||||||| ||||||||| || ||||| || || || || | ||||||||
Sbjct 56358 ATCGAGTTGGCATCCACATCAAATGTCACCTCAATCTGTGGAACACCACGAGGAGCAGGT 56417
Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393
|| || || ||| | ||| | || || || || || || | || |||
Sbjct 56418 GGAATACCAGTCAAGTCAAACTTGCCGAGCAAGTTGCAGTCCTTGGTACGTGCACGCTCA 56477
Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453
|| || || | || || || ||| || || || || || | ||| |||
Sbjct 56478 CCTTCAAACACCTGAATCAACACACCAGGCTGGTTGTCGCTGTAGGTAGAAAAGG-TCTC 56536
Query 517454 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512
|| || || |||||| || ||||| | ||| | ||||| | |||||| ||
Sbjct 56537 CGACTTCTTTGTAGGAATCGTCGTGTTGCGTGTAATGAGGGGTGTCATCACACCACCGGC 56596
Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 517572
|| || | ||| | ||| || || | ||||| | | || | | || |||||
Sbjct 56597 AGTCTCAATACCCATAGAGAGTGGTGCAACATCGAGCAAGAGCAAGTCCTGGGTCTTTTC 56656
Query 517573 ATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 517631
||| | ||| |||| |||||| ||||| | |||||||| ||||||||||| ||||
Sbjct 56657 TGAAGTGTCGCCAGACAA-AATAGCAGCTTGGACGGCAGCACCGTATGCAACAGCCTCAT 56715
Query 517632 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT- 517690
|||| || | || | || || | || || ||||| || | || | ||| | |||
Sbjct 56716 CAGGGTTGATGGTCTTGTTGAGCTCCTTGCCGTTGAAGAAGTCAGAGACAAGCT-TCTGG 56774
Query 517691 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 517750
|| || ||||| | ||||| ||||| | ||||| |||| ||| || || |||
Sbjct 56775 ACACGTGGGATACGGGTCGATCCACCAACAAGCACAATCTCATCCACACTCGACTTGTCC 56834
Query 517751 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA--GACCCGCTCTAAACAAGTCTG 517808
| || | ||| || || || ||||| || || | | |||| ||||||||||
Sbjct 56835 ATCTTGGCATCACGCAACACCTTCTCAACAGGCTCCATGGTACCGCGG--AACAAGTCTG 56892
Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACA 517868
|||||| || ||||| | || | |||| || | | | || |||| || || |
Sbjct 56893 CACAAAGCTCCTCGAACCTGGCACGCGTAATGCTGGTGTAAAAGTCGGTTCCCTCAAAGA 56952
Query 517869 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 517928
|| |||| ||||||| || || | ||| || || |||| ||| || ||||| || |
Sbjct 56953 GCGAGTCAATCTCAATCGATGTCTGTGCCGATGAGGAAAGTGTACGCTTGGCACGCTCGC 57012
Query 517929 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTC 517988
| || || | | | || | || || | | ||||||| | || | || |
Sbjct 57013 AAGCAGTACGCAAACGACGCAGAGCACGAGCATTTGTAGTCAAATCCTTCTTGAACTTGC 57072
Query 517989 TCTTGAAATCT-TCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAAT 518047
|||||| || | | | | ||| || ||||| || ||||| |||||||| || |
Sbjct 57073 GCTTGAACTCAGTGCAGA-AGTGTGTAACGAGACGGTTGTCAAAGTCTTCACCACCGAGA 57131
Query 518048 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTT 518107
| || | || | |||| | || | || | |||||||||| | | || | |
Sbjct 57132 TGTGTGTCACCGGCAGTAGACTTGACCTCAAAGATGCCATCTTCAATGGTGAGGAGCGAT 57191
Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167
|||||| ||| |||||||||| ||| || || || || || || || | | ||
Sbjct 57192 ACATCAAAGGTACCACCACCCAAATCGAAGATGAGCACGTTTTGCTCCTTCTGTCCCTTC 57251
Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227
| || ||||| || |||| |||||||||||| || || || || |||| |||||||||
Sbjct 57252 CTGTCGAGACCGTATGCAATAGCAGCAGCAGTAGGCTCGTTGATGATTCGCAAAACATTC 57311
Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287
| ||| ||||| || ||||| || || ||||| | || || ||||| || || |||
Sbjct 57312 ATACCGGCAATGAGACCGGCATCCTTGGTTGCTTGACGCTGGGAGTCGTTGAAGTAGGCA 57371
Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347
|||||||| | ||| || | ||||| | |||| | || || || || | |
Sbjct 57372 GGAACAGTGACAACAGCGTTCGTTACCTTGGTACCGAGGTATGCTTCAGCAGTCTCACGC 57431
Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCA-TTTTG 518406
|| || | | | |||||| || |||| || || | ||| ||| ||| |||
Sbjct 57432 ATCTTTGTAAGGACCATTGAAGAGATTTCCTCGGGTGTGAATTCCTTCTTCTCACCCTTG 57491
Query 518407 ATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTT 518466
| | || || | ||||| | | || || || |||||||||| ||
Sbjct 57492 A-ACTCCACCTCGATGACGGGTTTTGATGCCTTGTCGATGACCTTGAATGGCCAGTGCTT 57550
Query 518467 CATATCTGATTGAACACTTTG--GTCATTAAAATCTCTACCAATTAATCGTTTTGCATCA 518524
||| |||| ||| ||| | | ||| ||| | | ||||| | || || |||||
Sbjct 57551 CATGTCTGCTTG--CACCTCGCTGTCTGCAAAGTTGCGGCCAATGAGACGCTTCGCATCG 57608
Query 518525 AAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 518584
|| | || ||| ||| || || || |||| | ||||| ||||| |||||||
Sbjct 57609 AAGACTGTGTTGTGTGGGTTCATGGCGACTTGGTTCTTGGCGGCATCACCAATCAACCTC 57668
Query 518585 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 518644
|| || || | || | || || || || ||||| || || || || |||||||| ||
Sbjct 57669 TCGGTATCGTTGAAAGCGACGTACGACGGTGTTGTACGGTTTCCCTGGTCATTCGCGATG 57728
Query 518645 ATTTCAACTTT 518655
|| || || ||
Sbjct 57729 ATGTCGACGTT 57739
>seq3
Length=560494
Score = 114 bits (126), Expect = 1e-19
Identities = 254/380 (67%), Gaps = 6/380 (2%)
Strand=Plus/Plus
Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318
|||||||| || || | |||||| |||| | ||||| || || ||||| ||||| ||
Sbjct 199050 GCAGTCACCTTGAGGACACCATTCTCATCAATCTCAAAGGTCACCTCAATCTGAGGCACA 199109
Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378
|| | ||||||||||||| || ||| | || | || || || || | ||
Sbjct 199110 CCACGAGGAGCAGGTGGGATACCAGTCAAGTCGAACTTACCAAGCAAGTTGTTGGCCTTG 199169
Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438
|| || ||| ||||| || || | ||| || | ||| | || ||| || || ||
Sbjct 199170 GTCAAGGATCGCTCACCTTCAAACACTTGAATGGAAACAATAGCTTGGTTGTCGGACGCC 199229
Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 517498
|||| || | | || || || || || ||||| | | |||| | ||||||
Sbjct 199230 GTTGAGAAGATTTGAGACTTCTTTGTTGGGATGACGGTGTTGCGACCAATCAACTTGGTC 199289
Query 517499 ATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 517558
|| | |||||||| ||| || | |||||||| || || |||||||||| || | | |
Sbjct 199290 ATGACACCACCTGTTGTCTCAATACCAAGAGTGAGTGGGTTGACATCAACGAGCAAGACA 199349
Query 517559 TTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATAT 517618
| |||| ||| ||| | ||||| | || | || | ||||||||||||
Sbjct 199350 TCCTGAACACCTTCCTCA-----CGCGACAAG-ACGGCACCCTGCACAGCAGCACCATAG 199403
Query 517619 GCAACAGCTTCATCAGGATT 517638
||||||||||||||||| ||
Sbjct 199404 GCAACAGCTTCATCAGGGTT 199423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780820216575064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |