Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq24 426 2e-114
seq5 210 3e-49
seq3 181 1e-40
>seq24
Length=98465
Score = 426 bits (472), Expect = 2e-114
Identities = 1052/1586 (66%), Gaps = 20/1586 (1%)
Strand=Plus/Plus
Query 6572 TCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAAT 6631
|| ||||| ||||||||| || || |||||| ||||| || || || || ||
Sbjct 56226 TCCTCATCAGCATACTTTTCAGCCTCAGAGACCATGCGCTCAATCTCCTCCTTGGACAAA 56285
Query 6632 CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691
| ||||| || || ||||| ||| || | || || |||| |||| || |||
Sbjct 56286 CGTCCCTTGTCGTTGGTAATGACAATGTTGTTGGTCTTGCCCGTTCCCTTTTCAGTGGCA 56345
Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751
| || | || || ||||| ||||| || | || | ||| ||||| |||
Sbjct 56346 GAAATGTTGAGGATCGAGTTGGCATCCACATCAAATGTCACCTCAATCTGTGGAACACCA 56405
Query 6752 CTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC 6811
| || || | ||||||||| || || ||||| | || || || || ||| | |
Sbjct 56406 CGAGGAGCAGGTGGAATACCAGTCAAGTCAAACTTGCCGAGCAAGTTGCAGTCCTTGG-- 56463
Query 6812 TTCTT--ACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCT-TGTGCC 6868
| | | ||| ||||||||| | || | ||| ||| |||| || || || |||
Sbjct 56464 TACGTGCACGCTCACCTTCAAACACCTGAATCAACACACCAGGCTGGTTGTCGCTGTAG- 56522
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| || ||| | | ||||| | ||||||||||| || | | ||| | || |||
Sbjct 56523 GTAGAAAAGGTCTCCGACTTCTTTGTAGGAATCGTCGTGTTGCGTGTAATGAGGGGTGTC 56582
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTC---CAAGAGTAAC 6985
|| | |||||| ||| || | || | ||| || |||| || || |||||| ||
Sbjct 56583 ATCACACCACCGGCAGTCTCAATACCCATAGAGAGTGGTGCAACATCGAGCAAGAGCAA- 56641
Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045
||| || ||| || || | || || || |||||||| | || |||
Sbjct 56642 --GTCCTGGGTCTTTTCTGAAGTGTCGCCAGACAAAATAGCAGCTTGGACGGCAGCACCG 56699
Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105
||||| || |||||||| ||||| || || || || || || || ||||| || | ||
Sbjct 56700 TATGCAACAGCCTCATCAGGGTTGATGGTCTTGTTGAGCTCCTTGCCGTTGAAGAAGTCA 56759
Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165
|| | | | || | ||||| || ||||||||||| || | || || |||| |
Sbjct 56760 GAGACAAGCTTCTGGACACGTGGGATACGGGTCGATCCACCAACAAGCACAATCTCATCC 56819
Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225
|| |||| || || ||||| | || || | || || ||||| |||||
Sbjct 56820 ACACTCGACTTGTCCATCTTGGCATCACGCAACACCTTCTCAACAGGCTCCATGGTACCG 56879
Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285
||||||||||| ||| || ||||| || | ||||| |||||| || || || ||
Sbjct 56880 CGGAACAAGTCTGCACAAAGCTCCTCGAACCTGGCACGCGTAATGCTGGTGTAAAAGTCG 56939
Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345
|| || | | ||| ||||| ||||| | ||| ||||||| || || | || |||
Sbjct 56940 GTTCCCTCAAAGAGCGAGTCAATCTCAATCGATGTCTGTGCCGATGAGGAAAGTGTACGC 56999
Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405
|| || ||||| || || || || |||||||| || ||||| | || | | |||
Sbjct 57000 TTGGCACGCTCGCAAGCAGTACGCAAACGACGCAGAGCACGAGCATTTGTAGTCAAATCC 57059
Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465
||||| || || || ||||| |||||||| || ||| | || || |||
Sbjct 57060 TTCTTGAACTTGCGCTTGAACTCAGTGCAGAAGTGTGTAACGAGACGGTTGTCAAAGTCT 57119
Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525
|||||||| | ||||| || || || || | ||||| |||||||| || ||||||||
Sbjct 57120 TCACCACCGAGATGTGTGTCACCGGCAGTAGACTTGACCTCAAAGATGCCATCTTCAATG 57179
Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585
| | | ||| |||||||| ||||||||||||| || || ||||| ||||| ||
Sbjct 57180 GTGAGGAGCGATACATCAAAGGTACCACCACCCAAATCGAAGATGAGCACGTTTTGCTCC 57239
Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645
| | | ||| | ||||||||||| || ||||| || || || || || || || ||
Sbjct 57240 TTCTGTCCCTTCCTGTCGAGACCGTATGCAATAGCAGCAGCAGTAGGCTCGTTGATGATT 57299
Query 7646 CG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704
|| || ||| |||| || ||||| | ||||| || || ||||| || || || ||
Sbjct 57300 CGCAAAACA-TTCATACCGGCAATGAGACCGGCATCCTTGGTTGCTTGACGCTGGGAGTC 57358
Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764
||| |||||||| || || || || || |||| ||| || || ||||||| || | |||
Sbjct 57359 GTTGAAGTAGGCAGGAACAGTGACAACAGCGTTCGTTACCTTGGTACCGAGGTATGCTTC 57418
Query 7765 CGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTT 7824
|| | || ||| || ||||| ||||| || || || || || | | || | ||
Sbjct 57419 AGCAGTCTCACGCATCTTTGTAAGGACCATTGAAGAGATTTCCTCGGGTGTGAATTCCTT 57478
Query 7825 CGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTT 7884
| | ||||| || || || || || || | |||||| | || | ||| |||||
Sbjct 57479 CTTCTCACCCTTGAACTCCACCTCGATGACGGGTTT---TGATGCCTTGTCGATGACCTT 57535
Query 7885 ATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAG 7944
| | ||| | ||||| || |||| |||| ||| | ||| || | || || ||
Sbjct 57536 GAATGGCCAGTGCTTCATGTCTGCTTGCACCTCGCTGTCTGCAAAGTTGCGGCCAATGAG 57595
Query 7945 ACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTC 8004
|||||| ||||| || |||||||| | ||||||||||| ||||||||| || || ||
Sbjct 57596 ACGCTTCGCATCGAAGACTGTGTTGTGTGGGTTCATGGCGACTTGGTTCTTGGCGGCATC 57655
Query 8005 CCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCC 8064
|| || | | || || || | || ||||||||||| || || || || || ||
Sbjct 57656 ACCAATCAACCTCTCGGTA---TCGTTGAAAGCGACGTACGACGGTGTTGTACGGTTTCC 57712
Query 8065 TTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGT 8124
||||| ||||| || || || ||| || | ||| ||| | |||| || || || ||
Sbjct 57713 CTGGTCATTCGCGATGATGTCGACGTTGTTATGTTGGAAGATGGCGACACATGAGTATGT 57772
Query 8125 TGTTCCTAAATCAATACCGATTGCTT 8150
|| || | ||| || ||||| ||||
Sbjct 57773 AGTGCCGAGATCGATTCCGATGGCTT 57798
>seq5
Length=451031
Score = 210 bits (232), Expect = 3e-49
Identities = 689/1058 (65%), Gaps = 27/1058 (3%)
Strand=Plus/Minus
Query 7025 GCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGT 7084
||||| ||||| | || ||||| || || |||||||||||||| || | || ||
Sbjct 85039 GCGGCCTGGACGGCAGCACCGTAAGCAACAGCCTCATCGGGGTTGATGGACTTGTTGCAC 84980
Query 7085 TCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCA 7144
|| || ||| ||| | || || | | | || ||||| ||||| || || ||||||
Sbjct 84979 TCCTTGCCG---AAAAAGTCAGACACGAGCTTCTGGATTTTGGGGATACGGGTAGATCCA 84923
Query 7145 CCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTT 7204
|| || | || || || | ||| || || || || ||||| ||||| || || ||
Sbjct 84922 CCCACGAGGACAATATCGTCCACCTTGGACTTGTCAATCTTGGAGTCCCGGAGAACCTTC 84863
Query 7205 TCGACAGGTTCCAT-----ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTG 7259
|| ||||| || || || || | || | || | | || ||| |||| ||||| |
Sbjct 84862 TCAACAGGGTCAATGGTCGAC-TTGAAGGTAGCAG--CGTTCA-AGT-CCTCGAAACGAG 84808
Query 7260 CACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319
|||| |||||| | | || || || | | | | ||| ||||| |||| || |
Sbjct 84807 CACGAGTAATGTTGGCGGAAAAGTCGGTTCCCTGGAAGAGCGAGTCAATCTCAACAGTGG 84748
Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379
| |||| | || || | || ||||| || ||||| || || | | | ||||||||
Sbjct 84747 TCTGTGTCACAGACGAGAGAGTACGCTTGGCACGCTCGCAAGCAGACCTGAGACGACGAA 84688
Query 7380 GGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT 7439
| ||||| |||| ||||||| || | ||| || || || || | |||||
Sbjct 84687 GTGCACGTGGGTCGTCGGAAATGTCGTGCTTGGACTTGCGGAGGAATTCAGCCTTGAAGT 84628
Query 7440 G-TCGAAGGAG-TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497
| |||| || | | | || || || |||||||| | || || || || || || ||
Sbjct 84627 GCTCGAGCAAGGTGTTG--TCAAAGTCCTCACCACCGAGATGAGTGTCTCCGGCAGTGGC 84570
Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557
|| || | |||| ||| || | ||| | | | || ||||| || |||||||| ||
Sbjct 84569 CTTAACCTGGAAGACACCACCCTGGATGGTCAGGATGGACACATCGAAAGTACCACCTCC 84510
Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT 7617
||||| |||||||| || ||| | || | ||| || ||||||||||| || ||
Sbjct 84509 GAGGTCGAAAATGAGAACATTCTTCTCCTTCTCTGAACGCTGGTCGAGACCGTAAGCAAT 84450
Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGC 7677
|| || || ||||| || || || ||||| || ||| || || ||||| | | ||
Sbjct 84449 GGCGGCGGCAGTTGGCTCGTTGATGATACGGAGGACGTTGAGTCCGGCAATGGCACCGGC 84390
Query 7678 ATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTC 7737
||| || || || || || || ||| ||||||||| || || || | || || |
Sbjct 84389 ATCCTTGGTGGCGGTACGCTGAGAGTCGGAAAAGTAGGCAGGCACAGTAATAACGGCCTT 84330
Query 7738 CGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797
| || ||||| ||| | | || || || || ||||| ||| || ||||| |
Sbjct 84329 CTCAACCTTCTTGTTGAGCTTGGTCTCTGCAATCTCCTTCATCTTGACGAGGACCATGGC 84270
Query 7798 TGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGG 7857
|| ||||| | || | || || ||| | |||||| | || || ||||| ||
Sbjct 84269 AGAGATCTCCTGAGGTGTGAATTGCTTCTTCTCACCGAGGTACTCGACCTCAATTTGAGG 84210
Query 7858 TTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTG 7917
| | | | ||| | | || || | | ||| | ||| | || | | |||||
Sbjct 84209 CTGACCATCGGCATC---CACGACATTGAAAGGCCAGACCTTCTTGTCTGCCTTGACCTC 84153
Query 7918 TTGGTC--CGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGG 7975
| ||| || || | || ||||| |||||||| || || || ||||| |||
Sbjct 84152 TGCGTCATCGTAA--CGACGGCCAATAAGGCGCTTTGCGTCGAATACGGTGTTGCGAGGG 84095
Query 7976 TTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAAC 8035
||||| || | |||||||| |||| ||| || | ||||| || | | || |||||
Sbjct 84094 TTCATAGCGGCCTGGTTCTTGGCCGAGTCTCCAACGAGACGCTCTTCA---TCTGTAAAA 84038
Query 8036 GCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTT 8073
|||||||| || ||||| || || || ||||||||
Sbjct 84037 GCGACGTATGAAGGGGTTGTACGGGCACCCTGGTCGTT 84000
>seq3
Length=560494
Score = 181 bits (200), Expect = 1e-40
Identities = 458/688 (67%), Gaps = 25/688 (4%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || ||||||||||| | ||| || || || | ||| || ||||||||| | ||||
Sbjct 199812 TCAAAGTCTTCACCACCGAGGTGGGTGTCACCGGAGGTTGCAAGGACTTCAAACACACCT 199871
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|||||||| | | || |||||||| ||||||||||| || ||| | | || |
Sbjct 199872 TCTTCAATGGAGAGGAGGGAGACATCAAAGGTACCACCACCGAGATCATACACGATAATC 199931
Query 7577 TT-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| ||| || || ||||| ||||| || || || || || |||||||| |||||
Sbjct 199932 TTGCGT----TCATCACCCTTCTTGTCGAGTCCATAGGCAATGGCAGCCGCCGTGGGTTC 199987
Query 7636 ATTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
||| | ||| |||| |||| || || || | || || | ||||| || || ||||| |
Sbjct 199988 ATTGACAATTCGAATGACA-TTGAGACCCGAGATGGTACCGGCATCCTTGGTGGCTTGCC 200046
Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754
||| | |||||| ||||||||||| || || || || || | || || | || |
Sbjct 200047 TTTGAGCATCGTTGAAGTAGGCCGGCACTGTCACCACAGCATGGGTCACGGCGTGTCCCA 200106
Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814
| | || || || | || ||||| || || ||||| | ||||||||||| | |
Sbjct 200107 AAAAGGACTCTGCCGTTTCCTTCATCTTACCGAGCACCATGGCGGAAATCTCTTCGGGTG 200166
Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874
|| || | | || || || | | ||||| | |||| || | ||||
Sbjct 200167 TGAATTGACGCTTCTCGCCCTTCACCTTGACTTCGACACTGGG-----ACG-ACCACCTT 200220
Query 7875 GGATAACC---TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACT 7931
| | ||| | | | | | |||||||| | ||| || | | ||| |||
Sbjct 200221 TGTTGACCATGGTGAAGGGAAGACCCTTCATATCCTTTTGCACTTCCTTGTCTTCAAAGG 200280
Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTG---TTT 7988
| | || || | ||| || || ||| | || ||||||| |||| | |||| ||
Sbjct 200281 TACGACCAATGAAACGTTTCGCGTCATACACGGTGTTTTCTGGGT---TTGCTGAGAATT 200337
Query 7989 GGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATG 8048
||||||| || || || |||| ||||||||||| | || || || ||||| | || |
Sbjct 200338 GGTTCTTGGCGGCATCACCGACAAGACGTTCATCA---TCGGTGAAGGCGACCCAGGAGG 200394
Query 8049 GGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGC 8108
| || | || || ||||||||||| || || |||| || || || |||| ||||
Sbjct 200395 GTGTGATACGGTTACCTTGGTCGTTGGCGATGATTTGGACTCGTCCGCCTTGCATCACGC 200454
Query 8109 CGACGCACGAATACGTTGTTCCTAAATC 8136
|||| ||||| || |||||||| | |||
Sbjct 200455 CGACACACGAGTAGGTTGTTCCGAGATC 200482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132450676960
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