Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq12 143 3e-29
>seq12
Length=806614
Score = 143 bits (158), Expect = 3e-29
Identities = 188/258 (73%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 159548 TTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATGT 159606
||||| | || ||||| ||||| ||||||||||||| || | ||| | | | ||
Sbjct 62 TTATGGTCACGTATCCTTCTACCTTTGGTGTATTTGAACCACAGGTCAAGGCTGCGATTG 121
Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666
| | | |||| || ||||||| || || ||| | ||||||||||| | ||||| |||
Sbjct 122 ATG-TGATTCACAAGCATGGTGGACAAGTCTATATGGATGGTGCAAACATGAATGCTCAG 180
Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726
|| || || ||| |||| |||||| ||||| ||||| || ||| | || |||
Sbjct 181 GTGGGACTTTGCTCACCCGGTGAGATTGGTGCTGATGTCTGTCACCTCAACCTGCACAAG 240
Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAA 159786
|| |||||||||||||| || ||||| ||||| ||||| || ||| |||| || ||
Sbjct 241 ACGTTCTGTATTCCACACGGCGGTGGTGGTCCAGGCGTGGGACCTGTTGGCGTGAAGAAG 300
Query 159787 CATCTCACACCATTTGTA 159804
|||||| |||||||| ||
Sbjct 301 CATCTCGCACCATTTCTA 318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050876571840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |