Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq12 143 3e-29 >seq12 Length=806614 Score = 143 bits (158), Expect = 3e-29 Identities = 188/258 (73%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 159548 TTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATGT 159606 ||||| | || ||||| ||||| ||||||||||||| || | ||| | | | || Sbjct 62 TTATGGTCACGTATCCTTCTACCTTTGGTGTATTTGAACCACAGGTCAAGGCTGCGATTG 121 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | | | |||| || ||||||| || || ||| | ||||||||||| | ||||| ||| Sbjct 122 ATG-TGATTCACAAGCATGGTGGACAAGTCTATATGGATGGTGCAAACATGAATGCTCAG 180 Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726 || || || ||| |||| |||||| ||||| ||||| || ||| | || ||| Sbjct 181 GTGGGACTTTGCTCACCCGGTGAGATTGGTGCTGATGTCTGTCACCTCAACCTGCACAAG 240 Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAA 159786 || |||||||||||||| || ||||| ||||| ||||| || ||| |||| || || Sbjct 241 ACGTTCTGTATTCCACACGGCGGTGGTGGTCCAGGCGTGGGACCTGTTGGCGTGAAGAAG 300 Query 159787 CATCTCACACCATTTGTA 159804 |||||| |||||||| || Sbjct 301 CATCTCGCACCATTTCTA 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050876571840