Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq43 248 2e-60
seq23 172 1e-37
>seq43
Length=605699
Score = 248 bits (274), Expect = 2e-60
Identities = 1014/1575 (64%), Gaps = 74/1575 (5%)
Strand=Plus/Minus
Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATG 212636
|||||| |||| || || ||||||||||| ||||| || ||||| ||| || | | |
Sbjct 34964 GCAGCCATGGTACGCAGGTAGTACATGCCCGTCTTGAGTCCCTTCTTCCAACCATAAAAG 34905
Query 212637 TGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAGG 212696
||||| | ||| | ||| | ||| ||| | | || ||||| | |
Sbjct 34904 TGCATCGATGTAATTTTA-----CCGAAT------GTCGGCGCCTTG----AGATGCAAG 34860
Query 212697 TTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCT 212756
|| ||||| || ||| || || || | | | |||||| ||||| || || | ||
Sbjct 34859 TTGAGGGATTGCGACTGATCAATAAAGGCACCACGGTCAGCAGCCATATCGATCACCACT 34800
Query 212757 CTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGG 212816
| || ||||||||||| || |||||| ||| |||| || | |||| | |||
Sbjct 34799 TTTTGAGAGAGCTCCCATACAGTCTTGTAGAGGGCTTTCGTCTCTGCAGGGATGTTTGGG 34740
Query 212817 ATGTTCTGCACAGACCCCCTGTGTATGGTCA--GCTGC-AGGCG-CATGTCCTCGTTCCA 212872
||||| |||||||| || | || | || | ||| | | ||| | ||| |||
Sbjct 34739 ATGTTTTGCACAGAGCCACC----ATCGGCAATGATGCGATTCTTCATATTCTCTGACCA 34684
Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932
||| ||| | | || ||||| || |||||| || | |||||| ||||| |
Sbjct 34683 GAGTCCCATCTCAACGAGATCCTTGAGCAACCAAGGGTTCACCACCTGGAACTCACCGGC 34624
Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992
|| || | | | ||||| ||| ||||||||||| | || || ||| |||||
Sbjct 34623 AAGGACACGACGCGAGTAAATGTTGCTCGTGTAGGGCTCAAAGCATTCATTGAAACCCAG 34564
Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC---CACCAGGAGACTGTTCCTCACTCC 213049
|||||||| ||| || |||||||| || || || |||| || ||| | | ||
Sbjct 34563 AATCTGTGACGTGGACGCAGTGGGCATCGGTGCACACAACAGG-GA--GTTGCGGATACC 34507
Query 213050 GTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTC 213109
|||| | || | ||| ||||||||||| || | |||
Sbjct 34506 ATGCTTTGCAATCTGCTCTTTGAGCGTCGCCCAGTCCCAGA-GCTTGGTGGGTG------ 34454
Query 213110 CTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGA 213169
| || ||||||| |||| ||||||| | || | | || ||||| ||| |
Sbjct 34453 --TGACATTCCACAAGTCATACTGCAAAAGTCCCTGAGAGGCAGGTGAGCCCTCGTAGGT 34396
Query 213170 GGAGTAGGGGCCATGCTCCTTG-GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGA 213228
||||| || || | || |||| |||||||| || || || | || ||| ||| |||||
Sbjct 34395 AGAGTATGGACCCT-CTTCTTGTGCCAGCTCACACGAGGCTTCAAGAGCACCGTGGTAGA 34337
Query 213229 TGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCA 213288
|||| ||||| || | |||| |||| ||||||||| || || ||| |||| | | |
Sbjct 34336 TGGTCTCAAAGATTTGGATGTTCAGCTCCTTGGCCTCGGGCGAGTCGAATGGCAGCTTAA 34277
Query 213289 -TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGG 213347
||| | || |||| || || || || || || | |||||||||| ||| | | |
Sbjct 34276 GTGCCAAG-AAGGCATCGGCGAGACCTTGCACACCAAGACCGATGGGTCGGTGACGCTTG 34218
Query 213348 TTAGACTTGGAGCACTC--CTCCAAGG----GGTAAAAGTTGCAGTCGATGATCTTGTTG 213401
|| ||| | ||| || ||| | |||| ||||| |||||||||||||||
Sbjct 34217 TT------GGAACGCTCAGCTTCAATGACTGGGTAGTAGTTGACGTCGATGATCTTGTTC 34164
Query 213402 AGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACG----TA 213457
| |||||| | | || |||| ||||| | || | || | | | | ||| |
Sbjct 34163 AAGTTGCGAGCAACAACCTTGGCGACATCGTGGAGCTTCTTGAAGTCGTAGACGGGTGTT 34104
Query 213458 GCCCCCGTCCTGCACA--AACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACC 213515
| | | || | || |||| ||| ||| ||| || ||||| || ||||||
Sbjct 34103 TCTGCGCGCATGTCGATGAAGGTGGGCAAGGCAATGGAGGCGAGATTGCAGACAGCCACC 34044
Query 213516 TCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCC 213575
|| | | | | |||||| | |||||||| |||| ||||||||| |||||| ||
Sbjct 34043 TCATCGGGTGCCGAGTACTCGACAATCTCGGTACACAAGTTGCTGCACTTGATGGTACCG 33984
Query 213576 AGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGCATGTAGGGGGACCC 213634
||||||| ||||| ||||| ||| | |||| |||||||| |||||| |||| ||
Sbjct 33983 AGGTTCTTCTGGTTCGACTT-GCGGTTGCAGGCGTCCTTGTACAGCATGAAGGGATTGCC 33925
Query 213635 GGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCT 213694
||||| || | | | || || | ||| || | | ||||||| | | |
Sbjct 33924 CGTCTCAGTTTGCGCCTCGAGAATAGCGTACCACAGCTTCTGTGCCTTGATGGTCTTCAT 33865
Query 213695 GACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGAC 213754
||| |||| | | |||||||| ||| | | | ||||| | ||| | ||
Sbjct 33864 GACCTTGCCGGCCTT---CTCGTACTTGGTGTACAAGGCTTCAAATTCATCGCCATACAC 33808
Query 213755 CCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGAC 213814
| || || || ||||| ||| |||||||| ||| || || | || ||
Sbjct 33807 CTCGTGCATACCAGGACATTCGTTGGGGCACATGAGCGACCACTCGCCATTCTCCTCCAC 33748
Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874
| || |||||| || || |||| ||| || || ||||| ||| | | | |||
Sbjct 33747 ACGCTTCATGAAGAGATCAGGGATCCAGAGAGCATAGAACAAGTCGCGTGCGCGGACCTC 33688
Query 213875 GTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTC 213934
||| || ||| ||||||| || || ||| |||||||||| |||||||| |||||
Sbjct 33687 TTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCAAAGATGTCTGCGTGCCATGGCTC 33628
Query 213935 CATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCAC 213991
||||| || |||||||| || || | |||| || || ||||| || ||||||
Sbjct 33627 AATGTAAATAGCAAAGGCACCTGGACGCTTGTTGCCACCTTGGTCGACATACCTGGCAGT 33568
Query 213992 CATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTA 214050
||||||||| ||||| | ||| | | |||||||| ||| || || || || || |
Sbjct 33567 GTTGTTGAAGACACGCAGCATGGGGATGATGCCGTTGGA-TGTACCATTTGTACCGGCAA 33509
Query 214051 TATACGAGCCGGAGGCCCTCAGGT--TGCTCATGGAGAGCCCTATGCCACCGGCGTACTT 214108
| || ||| | || | | | || ||| |||| || ||||||||||| |||
Sbjct 33508 TGTAACTGCCTGTTGCACGGATGCAGTGGACATTGAGA--CCAATGCCACCGGCTGTCTT 33451
Query 214109 GGAGATCATGGCGCA 214123
||||||||||| ||
Sbjct 33450 AGAGATCATGGCACA 33436
>seq23
Length=690853
Score = 172 bits (190), Expect = 1e-37
Identities = 560/862 (65%), Gaps = 16/862 (2%)
Strand=Plus/Minus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|||||||| || || | |||||||||||||| ||||| || | | || |||||||||
Sbjct 89231 TGGTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCGAGTGAAATGTTCTCC 89172
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGG 47959
|| ||| || || ||| |||| ||| | | | | ||| | | || ||
Sbjct 89171 ATAAAGTCAAATGGATTGCTGGTGTGATAGAACTTTTTGTTGCCAAGAGAGACGAGGAGT 89112
Query 47960 TGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTA-TGAGGGA 48018
|||| ||||| | || ||||| | |||||| | || || || | | ||||
Sbjct 89111 CGATCAGCGACAAATTCAATGTACTCGCGCATGAGCTTTGCATTGATACCCAATAAGGGG 89052
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
|| || | | | |||||| || ||| ||| |||| || ||||| | || |
Sbjct 89051 CATGGT-AGGGAGTCTGTGAGGAAAGCCTGCTCAATCTCAACAGCTTCAGTAATGATGTC 88993
Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTG-CTTGGCATAGAGCATGCAGGCAA 48137
| || | || ||| || ||||| || ||| || || |||| ||||| |
Sbjct 88992 TTGTACCTGTTGCTTTGAAGGCTTGTTCTTCAAGTGACTAAACA-AGAGA---CAGGCGA 88937
Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197
| || |||| | || ||||| || ||||||| | ||| ||| ||| || ||||
Sbjct 88936 AATCTGTGTGGAGACCCTCGTCACGAGAGATGAGCTCATTGCTAAAGGTGAGTCCCGGCA 88877
Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257
||| || | || |||||||| || || | ||||| ||||||||||| ||||| ||||
Sbjct 88876 TGAGACCACGCTTCTTGAGCCAAAAGATGGAGGCGAACGAGCCAGAGAAAAAGATTCCCT 88817
Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317
| || || || || || || | | | | || | || | | ||||| ||||||
Sbjct 88816 CGACAGCAGCAAAAGCCACAAGACGCAGTGCAAAGGTAGACTCGTCGTCTGCAATCCAGC 88757
Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377
|| ||||||||||| || | ||||||||| || || ||||| || || |||||| |
Sbjct 88756 GCAGTGCCCAGTCTGCTTTTTGCTTGATGCACGGGATTGTCTCGATTGCATCGAAGAGGT 88697
Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434
|| | | | || ||| | || || | |||| || | ||| |||| |
Sbjct 88696 GCTGCCGTTGAGCTTGTTCCTTGATGTATGTATCAATGAGGAG---GGAGTAGGTCTCTG 88640
Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494
|||| | || || ||||||||| || |||||| | ||||| || || |
Sbjct 88639 AGTGGATGTTTTCCGCCATGATCTGGAAGCCATAGAAGCATCGTGCCTCTGGTACTTGGA 88580
Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554
|||| ||||||| | ||| |||| ||| |||||||| || ||||| || |||||||
Sbjct 88579 CTTCGTTGGAGAAACGCTCGAGCAAATTTTCATTGACAATGCCATCACTGGCGGCAAAGA 88520
Query 48555 AGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCT 48611
| || ||||| || | ||| ||| |||| || | |||| || |||| | |
Sbjct 88519 AAGCGAGGACGTGGGAGATGAAGAAGCGTTCGTCGTCGTTGAGCTTGTTCTCCCAGTCGT 88460
Query 48612 GTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGT 48671
| | ||| ||| ||||| | || || | ||||||||||| || ||| |||||||
Sbjct 88459 GCAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCCAGAAGGATGCTTCTGCCTTTTTGT 88400
Query 48672 ACATGCCCCATATGTCCGGATA 48693
|||| ||| || || ||||
Sbjct 88399 ACATTTGCCAAATCTCGTGATA 88378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532287656960
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