Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq12 129 7e-25 >seq12 Length=806614 Score = 129 bits (142), Expect = 7e-25 Identities = 185/258 (72%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217 || |||||||| |||||| || || |||| ||| || ||||| ||||| ||||| || Sbjct 318 TAGAAATGGTGCGAGATGCTTCTTCACGCCAACAGGTCCCACGCCTGGACCACCACCGCC 259 Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACA 138277 |||||||||||||| ||||| || | || || ||||| ||||| |||||| |||| Sbjct 258 GTGTGGAATACAGAACGTCTTGTGCAGGTTGAGGTGACAGACATCAGCACCAATCTCACC 199 Query 138278 TGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACC 138337 ||| || || ||||| ||||| | ||||||||||| | ||| || || ||||| Sbjct 198 GGGTGAGCAAAGTCCCACCTGAGCATTCATGTTTGCACCATCCATATAGACTTGTCCACC 139 Query 138338 ATTGTCATGAACGATCTTACATATCTGTC-TGATGTTTGTTTCAAATACACCATGAGTCG 138396 || | |||| | | | || | | | ||| | || ||||||||||||| || | Sbjct 138 ATGCTTGTGAATCA-CATCAATCGCAGCCTTGACCTGTGGTTCAAATACACCAAAGGTAG 80 Query 138397 ATGGATATGTAATCATAA 138414 | ||||| || | ||||| Sbjct 79 AAGGATACGTGACCATAA 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998081550880