Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq12 129 7e-25
>seq12
Length=806614
Score = 129 bits (142), Expect = 7e-25
Identities = 185/258 (72%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217
|| |||||||| |||||| || || |||| ||| || ||||| ||||| ||||| ||
Sbjct 318 TAGAAATGGTGCGAGATGCTTCTTCACGCCAACAGGTCCCACGCCTGGACCACCACCGCC 259
Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACA 138277
|||||||||||||| ||||| || | || || ||||| ||||| |||||| ||||
Sbjct 258 GTGTGGAATACAGAACGTCTTGTGCAGGTTGAGGTGACAGACATCAGCACCAATCTCACC 199
Query 138278 TGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACC 138337
||| || || ||||| ||||| | ||||||||||| | ||| || || |||||
Sbjct 198 GGGTGAGCAAAGTCCCACCTGAGCATTCATGTTTGCACCATCCATATAGACTTGTCCACC 139
Query 138338 ATTGTCATGAACGATCTTACATATCTGTC-TGATGTTTGTTTCAAATACACCATGAGTCG 138396
|| | |||| | | | || | | | ||| | || ||||||||||||| || |
Sbjct 138 ATGCTTGTGAATCA-CATCAATCGCAGCCTTGACCTGTGGTTCAAATACACCAAAGGTAG 80
Query 138397 ATGGATATGTAATCATAA 138414
| ||||| || | |||||
Sbjct 79 AAGGATACGTGACCATAA 62
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998081550880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |