Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq42 143 2e-29 >seq42 Length=614792 Score = 143 bits (158), Expect = 2e-29 Identities = 226/321 (70%), Gaps = 6/321 (2%) Strand=Plus/Plus Query 34314 GAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATC 34373 |||||| || |||||||| | || | | |||| |||||||| |||||| ||||| Sbjct 404697 GAGCTCCGTTTCCGGGTTCTTGCAAGCACGGCACAGGACAAACTTATCGATGAATCCATC 404756 Query 34374 AAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG---TT 34430 | ||| || | |||| ||| ||||| | ||| ||||||||| | || || | Sbjct 404757 CAATGTGTCTTGCAGCTTACCGGCATCGTGTGCGCCATTGACGATGTAACGATCTACCTC 404816 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 | || | || || || | || || ||||| |||| ||||||||||| | ||| | Sbjct 404817 TGCGTTACAGA--TGACTT-GAGCACCGAGCTCAAACCCAAAGTACTTTGTGGTGTACAA 404873 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 || || || ||||||| |||||||| |||| |||||| || ||||||||||||||| Sbjct 404874 GGGAGGCCGCGCAAGCGCTTTGGCGATATCGGACATGTTTGGGACGACAGTCTTGATGCC 404933 Query 34551 GTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610 ||||| || ||||| | ||||| || ||||| |||||||| ||||| | ||| Sbjct 404934 ATTGCCTTTGCCTTCAATCTTGGACTGAATTTTGGGCATCTTGTAGCGATAGAAGGAGTC 404993 Query 34611 CGCCACATTGCGGTTAACGTT 34631 | |||| |||| || ||| Sbjct 404994 CTGGACATCGCGGCGAATGTT 405014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841378613692