Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq23 82.4 7e-11
>seq23
Length=690853
Score = 82.4 bits (90), Expect = 7e-11
Identities = 153/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 110035 GTATTCGCCTACACGTTTTTCGAAAAAATTAGTTTTGCCCTCGAGAGATATATTATTCAT 110094
||| || || ||||| || || || || || || ||||| |||| || || || | |||
Sbjct 89229 GTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCGAGTGAAATGTTCTCCAT 89170
Query 110095 AAACTCGAAAGGATTGACAGTGTTAAAGTGTTTGTCGTAGCCCAATTCGAATAGCAATCG 110154
||| || || |||||| |||| | || || | || ||| | || || | |||
Sbjct 89169 AAAGTCAAATGGATTGCTGGTGTGATAGAACTTTTTGTTGCCAAGAGAGACGAGGAGTCG 89110
Query 110155 ATCCGCCACAAATTCAATATACTCGCACATGGACTGTACGTTCATGCCTAACATGGCAAC 110214
||| || ||||||||||| ||||||| |||| || | | || || || || | ||
Sbjct 89109 ATCAGCGACAAATTCAATGTACTCGCGCATGAGCTTTGCATTGATACCCAATAAGGGGCA 89050
Query 110215 TGGTAGAGCGGTAGTaaaaaaaTCCTTTTCAATGTCGACAGCCTC 110259
|||||| | | || | ||| ||| ||||| || ||||| ||
Sbjct 89049 TGGTAGGGAGTCTGTGAGGAAAGCCTGCTCAATCTCAACAGCTTC 89005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094155198080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |