Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq24 356 7e-93 seq43 170 6e-37 seq3 150 5e-31 seq40 109 2e-18 seq5 105 2e-17 seq14 87.8 5e-12 >seq24 Length=98465 Score = 356 bits (394), Expect = 7e-93 Identities = 955/1441 (66%), Gaps = 23/1441 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || ||||| || || ||||| || | | ||| || | Sbjct 57796 GCCATCGGAATCGATCTCGGCACTACATACTCATGTGTCGCCATCTTCCAACATAACAAC 57737 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || ||||| || || ||| | ||||| || || ||||| || || | | Sbjct 57736 GTCGACATCATCGCGAATGACCAGGGAAACCGTACAACACCGTCGTACGTCGCTTTCAAC 57677 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||| | ||||||||||| | || || || |||| || || ||| | || Sbjct 57676 GATACCGAGAGGTTGATTGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCACACAAC 57617 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || || ||||| ||||| || ||||| | | ||| | |||| ||| | Sbjct 57616 ACAGTCTTCGATGCGAAGCGTCTCATTGGCCGCAACTTTGCAGACAGCGAGGTGCAAGCA 57557 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || | || || | || | | | ||| | | | ||||| | || ||| Sbjct 57556 GACATGAAGCACTGGCCATTCAAGGTCAT-CGACAAGGCA-TCA-AAACCCGTCATCGAG 57500 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 || || | || ||||| | || |||| |||||| ||||| || |||||||| | Sbjct 57499 GTGGAGTTCAAGGGTGAGAAGAAGGAATTCACACCCGAGGAAATCTCTTCAATGGTCCTT 57440 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 || ||| || | |||||||||||| | ||| | ||||| | |||||| | Sbjct 57439 ACAAAGATGCGTGAGACTGCTGAAGCATACCTCGGTACCAAGGTAACGAACGCTGTTGTC 57380 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 ||||| || ||||| || || || |||||||| ||||| || ||||| || |||| Sbjct 57379 ACTGTTCCTGCCTACTTCAACGACTCCCAGCGTCAAGCAACCAAGGATGCCGGTCTCATT 57320 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | |||||| | |||| || || || || |||||||| || |||||||| || Sbjct 57319 GCCGGTATGAATGTTTTGCGAATCATCAACGAGCCTACTGCTGCTGCTATTGCATACGGT 57260 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || || | | | | | | || |||| | || || || ||||| ||||||||||| Sbjct 57259 CTCGACAGGAAGGGACAGAAGGAGCAAAACGTGCTCATCTTCGATTTGGGTGGTGGTACC 57200 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 ||||||||||| || || || ||||||| || || ||||| || || | ||||| ||| Sbjct 57199 TTTGATGTATCGCTCCTCACCATTGAAGATGGCATCTTTGAGGTCAAGTCTACTGCCGGT 57140 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || |||||||| ||||| ||||| ||||| || ||||||||| | || || | || Sbjct 57139 GACACACATCTCGGTGGTGAAGACTTTGACAACCGTCTCGTTACACACTTCTGCACTGAG 57080 Query 349919 TTTAAGCGTCAAGCT-AAAATTGATATTGGAGA-TAATCCTAGAGCAATGCGTCGCCTAA 349976 || ||||| |||| | || | ||| ||| | ||| || | || ||||||| | Sbjct 57079 TTCAAGCG-CAAGTTCAAGAAGGAT-TTGACTACAAATGCTCGTGCTCTGCGTCGTTTGC 57022 Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036 | ||||| || || ||||| |||||| | | || || | | || || || ||||| | Sbjct 57021 GTACTGCTTGCGAGCGTGCCAAGCGTACACTTTCCTCATCGGCACAGACATCGATTGAGA 56962 Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATC--TATTACACGTGCTCGGTTTGA 350094 |||| || || ||| || | || | ||| || | ||||| ||||| |||| || Sbjct 56961 TTGACTCGCTCTTTGAGGGAACCGACT--TTTACACCAGCATTACGCGTGCCAGGTTCGA 56904 Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 || | ||| || | || | | || ||||| ||||| || || || || || Sbjct 56903 GGAGCTTTGTGCAGACTTGTTCCGCGGTACCATGGAGCCTGTTGAGAAGGTGTTGCGTGA 56844 Query 350155 TGCAAAAATGTCCAAAAATC-AG-ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212 ||| || ||| | || || || | ||||| | || | |||||||| || || ||| Sbjct 56843 TGCCAAGATG--GACAAGTCGAGTGTGGATGAGATTGTGCTTGTTGGTGGATCGACCCGT 56786 Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATC 350271 || ||| || || || | | ||||| || || || ||||| || | | | ||| | Sbjct 56785 ATCCCACGTGTCCAGAAGCTTGTCTCTGACTTCTTCAACGGCAAGGAGCTCAACAAGA-C 56727 Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 || || || ||||| ||||||||||| |||||||| || || || ||||||| ||||| Sbjct 56726 CATCAACCCTGATGAGGCTGTTGCATACGGTGCTGCCGTCCAAGCTGCTATTTTGTCTGG 56667 Query 350332 AAATAAGAGTTC---TAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCT 350388 | | ||| || | | || | | | || ||||| | ||||| || | Sbjct 56666 ---CGACACTTCAGAAAAGACCCAGGACTTGCTCTTGCTCGATGTTGCACCACTCTCTAT 56610 Query 350389 TGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACC 350448 || | || ||| | |||| || ||||| || ||| | | || | || | || Sbjct 56609 GGGTATTGAGACTGCCGGTGGTGTGATGACACCCCTCATTACACGCAACACGACGATTCC 56550 Query 350449 TACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCA 350508 |||||| ||||| | || |||||||| | || || ||||| | || ||||| Sbjct 56549 TACAAAGAAGTCGGAGACCTTTTCTACCTACAGCGACAACCAGCCTGGTGTGTTGATTCA 56490 Query 350509 AGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCT 350568 || ||||||||||| ||||| || || || || || || || | ||| | | Sbjct 56489 GGTGTTTGAAGGTGAGCGTGCACGTACCAAGGACTGCAACTTGCTCGGCAAGTTTGACTT 56430 Query 350569 AAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGA 350628 | || |||||||| ||| | || ||||| |||||||| || | || ||| | || Sbjct 56429 GACTGGTATTCCACCTGCTCCTCGTGGTGTTCCACAGATTGAGGTGACATTTGATGTGGA 56370 Query 350629 T 350629 | Sbjct 56369 T 56369 Score = 161 bits (178), Expect = 3e-34 Identities = 553/855 (65%), Gaps = 8/855 (1%) Strand=Plus/Plus Query 182940 TCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTT 182999 || |||||||||| || ||||||||||||||||| || || |||||||| ||||| Sbjct 56370 TCCACATCAAATGTCACCTCAATCTGTGGAACACCACGAGGAGCAGGTGGAATACCAGTC 56429 Query 183000 AAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACT 183059 || ||| | || | || || || || | ||| | ||| |||||| | || Sbjct 56430 AAGTCAAACTTGCCGAGCAAGTTGCAGTCCTTGGTACGTGCACGCTCACCTTCAAACACC 56489 Query 183060 TGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATA 183119 ||||| || | ||||| || || || || |||||||| | | || || || Sbjct 56490 TGAATCAACACACCAGGCTGGTTGTCGCTGTAGGTAGAAAAGGTCTCCGACTTCTTTGTA 56549 Query 183120 GGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCT 183179 ||||| || | || || | || | ||||| || | | |||||| || | || Sbjct 56550 GGAATCGTCGTGTTGCGTGTAATGAGGGGTGTCATCACACCACCGGCAGTCTCAATACCC 56609 Query 183180 AATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTTATCTGATTTAATATCA 183239 | || | |||||| ||||| || || | || || || || ||||| | || Sbjct 56610 ATAGAGAGTGGTGCAACATCGAGCAAGAGCAAGTCCTGGGTCTTTTCTGAAGTGTCGCCA 56669 Query 183240 CTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAA 183299 ||||| |||||||| || || ||||| ||||||||||| ||||| ||||| | || Sbjct 56670 GACAAAATAGCAGCTTGGACGGCAGCACCGTATGCAACAGCCTCATCAGGGTTGA-TGGT 56728 Query 183300 CGAGAT-AATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCT 183358 | | | | || ||||| || || || || || | | | || | ||| || | Sbjct 56729 CTTGTTGAGCTCCTTGCCGTTGAAGAAGTCAGAGACAAGCTTCTGGACACGTGGGATACG 56788 Query 183359 AGTTGAACCACCGACTAATACTACTTCATCGATATT--ACTTTTACTAATTTGTGAATCT 183416 || || ||||| || | || | ||||| | | | |||| | | || | | ||| Sbjct 56789 GGTCGATCCACCAACAAGCACAATCTCATCCACACTCGACTTGTCC--ATCTTGGCATCA 56846 Query 183417 TTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCT 183476 || || || |||||||| ||||| || | || || ||| ||| | ||| || Sbjct 56847 CGCAACACCTTCTCAACAGGCTCCATGGTACCGCGGAACAAGTCTGCACAAAGCTCCTCG 56906 Query 183477 AATCTTGCTCTAGTTAAAGAT-GaaaaaaaGTCAATACCATTATATAAGGAATCAATTTC 183535 || || || | | ||| | | | ||||||| | || | | | | || ||||| || Sbjct 56907 AACCTGGCACGCG-TAATGCTGGTGTAAAAGTCGGTTCCCTCAAAGAGCGAGTCAATCTC 56965 Query 183536 AATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAG 183595 ||||||||| |||| ||||| || | ||| | || || || || || || || | | Sbjct 56966 AATCGATGTCTGTGCCGATGAGGAAAGTGTACGCTTGGCACGCTCGCAAGCAGTACGCAA 57025 Query 183596 TCGACGTAATGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGT 183655 ||||| | | | | ||| || | ||| | || || | || || ||||| Sbjct 57026 ACGACGCAGAGCACGAGCATTTGTAGTCAAATCCTTCTTGAACTTGCGCTTGAACTCAGT 57085 Query 183656 AATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGC 183715 || ||| || | | | ||||| ||||||||||| | |||||| || || || Sbjct 57086 GCAGAAGTGTGTAACGAGACGGTTGTCAAAGTCTTCACCACCGAGATGTGTGTCACCGGC 57145 Query 183716 AGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACC 183775 ||||| || || ||||| || || |||||||| | | | ||||||||||| ||||| Sbjct 57146 AGTAGACTTGACCTCAAAGATGCCATCTTCAATGGTGAGGAGCGATACATCAAAGGTACC 57205 Query 183776 ACCACCCAAATCAAA 183790 |||||||||||| || Sbjct 57206 ACCACCCAAATCGAA 57220 >seq43 Length=605699 Score = 170 bits (188), Expect = 6e-37 Identities = 181/236 (77%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || ||||| || || || ||||| || |||||||| | Sbjct 451100 TTTGCATACCACCACGGAGACGGAGGACAAGGTGGAGGGTTGACTCCTTCTGAATATTGT 451159 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || || ||||| ||||| || || |||||||| || ||||| ||||||| Sbjct 451160 AGTCGGCCAAAGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGAT 451219 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 |||| ||||| || || || |||||||| || ||| || ||||| ||||| | || ||| Sbjct 451220 CAGGTGGAATGCCCTCCTTGTCCTGAATCTT-GCTCTTGACATTGTCAATGGTGTCTGAT 451278 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || ||||| | |||||||| || || || || ||||| |||||||| Sbjct 451279 GACTCAACCTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 451334 Score = 158 bits (174), Expect = 4e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || ||||| ||||| || || || || || || Sbjct 451332 CATACCACCACGAAGACGGAGCACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTC 451391 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | ||| || ||||||||||| || || ||||| || || | ||| ||||| || || Sbjct 451392 TGCAAGTGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAAACGCTGCTGGTCCGG 451451 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||||||||| | || ||||| ||||| | || || | ||| Sbjct 451452 TGGAATCCCTTCCTTGTCCTGAATTTTCGACTTGACATTGTCAATGGTGTCTGAGGATTC 451511 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCT 140733 ||| ||||| |||| ||||| || || ||||| || ||||| |||| Sbjct 451512 AACCTCAAGGGTAATGGTCTTGCCAGTAAGTGTCTTGACAAAGATCT 451558 Score = 149 bits (164), Expect = 2e-30 Identities = 176/236 (75%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | | || ||||| || ||||| ||||| || || ||||| | Sbjct 450644 TTTGCATACCACCGCGGAGACGGAGCACAAGGTGGAGAGTTGACTCCTTCTGGATATTGT 450703 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | | || || || || ||||| || || |||||||| || ||||| ||||| | Sbjct 450704 AGTCTGCAAGCGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGT 450763 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGAT 140681 |||| ||||| || || || || ||||| || ||| || || || ||||| | || ||| Sbjct 450764 CAGGTGGAATGCCCTCCTTGTCTTGAATCTT-GCTCTTGACGTTGTCAATGGTGTCTGAT 450822 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||| ||||| ||||||| |||||||| || | || || || ||||||||||| Sbjct 450823 GATTCGACTTCGAGTGTAATGGTCTTTCCAGTCAAAGTCTTAACGAAAATCTGCAT 450878 Score = 134 bits (148), Expect = 4e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600 || ||||| || ||||| || || || | || || || ||||| ||||| || |||||| Sbjct 450454 GTTGACTCCTTCTGAATGTTGTAGTCGGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCA 450513 Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TT 140659 |||||||| ||||| ||||| ||||| ||||| ||||| || || ||||| || ||| || Sbjct 450514 GCAAAGATGAGACGCTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTT-GCTCTT 450572 Query 140660 TACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 || || ||||| | || |||| || || || ||||| | |||||||| || || || Sbjct 450573 GACGTTGTCAATGGTGTCTGATGACTCTACCTCGAGTGTGATGGTCTTTCCAGTCAGAGT 450632 Query 140720 TTTTACAAAAATCTGCAT 140737 || || ||||| ||||| Sbjct 450633 CTTGACGAAAATTTGCAT 450650 >seq3 Length=560494 Score = 150 bits (166), Expect = 5e-31 Identities = 269/392 (69%), Gaps = 3/392 (1%) Strand=Plus/Minus Query 349523 CAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAA 349582 ||||| ||||||||| ||||| | ||||| | | ||| |||||||||| || || Sbjct 200173 CAATTCACACCCGAAGAGATTTCCGCCATGGTGCTCGGTAAGATGAAGGAAACGGCAGAG 200114 Query 349583 GCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGAT 349642 | | ||| || | | || || ||||||| | || || || ||||| || || ||| Sbjct 200113 TCCTTTTTGGGACACGCCGTGACCCATGCTGTGGTGACAGTGCCGGCCTACTTCAACGAT 200054 Query 349643 GCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATG 349702 || || | || || || ||||| || | ||| |||| | ||||| | |||| Sbjct 200053 GCTCAAAGGCAAGCCACCAAGGATGCCGGTACCATCTCGGGTCTCAATGTCATTCGAATT 199994 Query 349703 ATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaa 349762 | ||||||||||| || || || ||||| ||||| || || || | | ||| | ||| Sbjct 199993 GTCAATGAACCCACGGCGGCTGCCATTGCCTATGGACTCGACAAGAAGGGTG---ATGAA 199937 Query 349763 aaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTT 349822 || ||| | | | |||| | ||||||||||| |||||||| || || || | || Sbjct 199936 CGCAAGATTATCGTGTATGATCTCGGTGGTGGTACCTTTGATGTCTCCCTCCTCTCCATT 199877 Query 349823 GAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGAT 349882 ||||| || | |||||||| ||||| | ||||| || || || ||||| ||||| Sbjct 199876 GAAGAAGGTGTGTTTGAAGTCCTTGCAACCTCCGGTGACACCCACCTCGGTGGTGAAGAC 199817 Query 349883 TTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||||| || || || || || ||||| || Sbjct 199816 TTTGACAACCGCGTCATTGACCACTTTGTCAA 199785 >seq40 Length=667070 Score = 109 bits (120), Expect = 2e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||| ||||| | | || || || || ||||| ||||| || || || || || || Sbjct 1507 ATACCTCCACGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCT 1448 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 | | || || || || || || || || ||||||||||| ||||| ||||| ||||| Sbjct 1447 GCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGC 1388 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || ||||| || ||||| ||||| | || ||||| || || | || || | || Sbjct 1387 GGGATGCCTTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATTGTGTCTGAGGACTCG 1328 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || || || || || || ||||| Sbjct 1327 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCAT 1278 >seq5 Length=451031 Score = 105 bits (116), Expect = 2e-17 Identities = 444/691 (64%), Gaps = 29/691 (4%) Strand=Plus/Plus Query 349216 AGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT------GTAGAAATAAT 349269 ||| || ||||| || ||||| | ||| |||||| ||||| | || || || || Sbjct 83936 AGGCACGACTTACTCCTGTGTGGGTGTATGGCAAGATGATTCTCCCAATGTCGAGATTAT 83995 Query 349270 TGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCG 349329 || || || ||| | | ||||| || |||||||| || ||||| || ||||| Sbjct 83996 CAGCAACGACCAGGGTGCCCGTACAACCCCTTCATACGTCGCTTTTACAGATGAAGAGCG 84055 Query 349330 TATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGA 349389 | | |||| || || || || || || || ||| || || || || || || || Sbjct 84056 TCTCGTTGGAGACTCGGCCAAGAACCAGGCCGCTATGAACCCTCGCAACACCGTATTCGA 84115 Query 349390 TGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC--AAATCTACACAATCTGATCTAAAA 349447 || ||||| |||||||| | ||| |||| | | | || | | || | | || Sbjct 84116 CGCAAAGCGCCTTATTGGCCGTCGTTACGATGACGCAGAGGT-CA-AGGCAGA-CAAGAA 84172 Query 349448 CATTTT-CCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATA 349506 | | ||||| | ||| || | | || || | | || |||||||| || || Sbjct 84173 GGTCTGGCCTTTCAATGTCGTGG---ATGCCGATGGTCAGCCTCAAATTGAGGTCGAGTA 84229 Query 349507 TAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAAT 349566 ||||| | || ||||| ||| | || || || | ||||| | || || || Sbjct 84230 CCTCGGTGAGAAGAAGCAATTCACACCTCAGGAGATCTCTGCCATGGTCCTCGTCAAGAT 84289 Query 349567 GAAGGAAATTGCTGA-AGCATATTTAGGTGAAACAGTAACTG----ATGCTGTTATTACT 349621 |||||| ||||| || | || || | || || | | | || ||||||||| Sbjct 84290 GAAGGAGATTGCAGAGACCA-----AGCTCAACAAGAAGGTTGAGAAGGCCGTTATTACT 84344 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || ||||| ||| || | |||||| | || || || ||||| || |||||| Sbjct 84345 GTGCCTGCCTACTTTTCCGACTCTCAGCGTACCGCCACCAAGGATGCCGGTGCCATTGCC 84404 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | || || || | || || || || || ||||| || || ||||| || || || Sbjct 84405 GGACTCAACGTCCTCCGTATCATCAACGAGCCAACTGCCGCCGCCATTGCTTACGGTCTC 84464 Query 349742 GATAA--AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799 || | | || || | || || ||| |||| ||||| || | || |||||||||| Sbjct 84465 GACCAGCGTTCAGAGA--AGGAGAAGAATGTTCTCATTTTCGACCTCGGAGGTGGTACTT 84522 Query 349800 TTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 | ||||| || | || || | | | || | || | ||||| || ||||| || | Sbjct 84523 TCGATGTGTCCATCCTGACCATCCAGGGTGGTGTCTTCCAGGTTAAGGCCACTGCCGGAG 84582 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATAA 349890 | || ||||| ||||| || || ||||| || Sbjct 84583 ACACTCATCTCGGTGGTGAGGACTTTGACAA 84613 >seq14 Length=253719 Score = 87.8 bits (96), Expect = 5e-12 Identities = 180/266 (68%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 378183 ATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGT 378242 |||||| |||| | ||| || | || || | ||| || || ||||||||| || Sbjct 132909 ATCATAGTTAACACCGACATCCTCGAGCGCCTTGACAAGACGACGCTGAATATAACCTGT 132850 Query 378243 TTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAA 378302 | ||| || || || |||||||| | ||| ||||||| |||| ||||||||||| Sbjct 132849 CTCGGCAGTCTTGACGGCTGTATCAATCAGACCTTCACGACCGGCCATGGCATGGAAGAA 132790 Query 378303 TAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCT-- 378360 ||||| || || | |||| | | ||| |||| | |||||| | ||| || Sbjct 132789 GAATTCTTGTGGTGTCAAACCACGCAGGTAAGAATTCTCCACAAATCCAC--GCGACTCG 132732 Query 378361 GGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATT 378420 || || | |||| |||||| | || || || || || || || ||||| |||||| Sbjct 132731 GGTGAGTAGTCATCCTTTGTAAAGTGCGGCAACGTGCGGAACTTGAAGCCATAGGGAATT 132672 Query 378421 CGTTTTCCATCAACATTCTGTTGACC 378446 || ||||| || || | || ||||| Sbjct 132671 CGCTTTCCTTCCACCATTTGCTGACC 132646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253545775332