Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq24 356 7e-93
seq43 170 6e-37
seq3 150 5e-31
seq40 109 2e-18
seq5 105 2e-17
seq14 87.8 5e-12
>seq24
Length=98465
Score = 356 bits (394), Expect = 7e-93
Identities = 955/1441 (66%), Gaps = 23/1441 (2%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || ||||||||| | || ||||| || || ||||| || | | ||| || |
Sbjct 57796 GCCATCGGAATCGATCTCGGCACTACATACTCATGTGTCGCCATCTTCCAACATAACAAC 57737
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || || || ||||| || || ||| | ||||| || || ||||| || || | |
Sbjct 57736 GTCGACATCATCGCGAATGACCAGGGAAACCGTACAACACCGTCGTACGTCGCTTTCAAC 57677
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || ||| | ||||||||||| | || || || |||| || || ||| | ||
Sbjct 57676 GATACCGAGAGGTTGATTGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCACACAAC 57617
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438
|| || || ||||| ||||| || ||||| | | ||| | |||| ||| |
Sbjct 57616 ACAGTCTTCGATGCGAAGCGTCTCATTGGCCGCAACTTTGCAGACAGCGAGGTGCAAGCA 57557
Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498
|| | || || | || || | || | | | ||| | | | ||||| | || |||
Sbjct 57556 GACATGAAGCACTGGCCATTCAAGGTCAT-CGACAAGGCA-TCA-AAACCCGTCATCGAG 57500
Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558
|| || | || ||||| | || |||| |||||| ||||| || |||||||| |
Sbjct 57499 GTGGAGTTCAAGGGTGAGAAGAAGGAATTCACACCCGAGGAAATCTCTTCAATGGTCCTT 57440
Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618
|| ||| || | |||||||||||| | ||| | ||||| | |||||| |
Sbjct 57439 ACAAAGATGCGTGAGACTGCTGAAGCATACCTCGGTACCAAGGTAACGAACGCTGTTGTC 57380
Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678
||||| || ||||| || || || |||||||| ||||| || ||||| || ||||
Sbjct 57379 ACTGTTCCTGCCTACTTCAACGACTCCCAGCGTCAAGCAACCAAGGATGCCGGTCTCATT 57320
Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738
|| || | |||||| | |||| || || || || |||||||| || |||||||| ||
Sbjct 57319 GCCGGTATGAATGTTTTGCGAATCATCAACGAGCCTACTGCTGCTGCTATTGCATACGGT 57260
Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798
|| || | | | | | | || |||| | || || || ||||| |||||||||||
Sbjct 57259 CTCGACAGGAAGGGACAGAAGGAGCAAAACGTGCTCATCTTCGATTTGGGTGGTGGTACC 57200
Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858
||||||||||| || || || ||||||| || || ||||| || || | ||||| |||
Sbjct 57199 TTTGATGTATCGCTCCTCACCATTGAAGATGGCATCTTTGAGGTCAAGTCTACTGCCGGT 57140
Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918
|| |||||||| ||||| ||||| ||||| || ||||||||| | || || | ||
Sbjct 57139 GACACACATCTCGGTGGTGAAGACTTTGACAACCGTCTCGTTACACACTTCTGCACTGAG 57080
Query 349919 TTTAAGCGTCAAGCT-AAAATTGATATTGGAGA-TAATCCTAGAGCAATGCGTCGCCTAA 349976
|| ||||| |||| | || | ||| ||| | ||| || | || ||||||| |
Sbjct 57079 TTCAAGCG-CAAGTTCAAGAAGGAT-TTGACTACAAATGCTCGTGCTCTGCGTCGTTTGC 57022
Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036
| ||||| || || ||||| |||||| | | || || | | || || || ||||| |
Sbjct 57021 GTACTGCTTGCGAGCGTGCCAAGCGTACACTTTCCTCATCGGCACAGACATCGATTGAGA 56962
Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATC--TATTACACGTGCTCGGTTTGA 350094
|||| || || ||| || | || | ||| || | ||||| ||||| |||| ||
Sbjct 56961 TTGACTCGCTCTTTGAGGGAACCGACT--TTTACACCAGCATTACGCGTGCCAGGTTCGA 56904
Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154
|| | ||| || | || | | || ||||| ||||| || || || || ||
Sbjct 56903 GGAGCTTTGTGCAGACTTGTTCCGCGGTACCATGGAGCCTGTTGAGAAGGTGTTGCGTGA 56844
Query 350155 TGCAAAAATGTCCAAAAATC-AG-ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212
||| || ||| | || || || | ||||| | || | |||||||| || || |||
Sbjct 56843 TGCCAAGATG--GACAAGTCGAGTGTGGATGAGATTGTGCTTGTTGGTGGATCGACCCGT 56786
Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATC 350271
|| ||| || || || | | ||||| || || || ||||| || | | | ||| |
Sbjct 56785 ATCCCACGTGTCCAGAAGCTTGTCTCTGACTTCTTCAACGGCAAGGAGCTCAACAAGA-C 56727
Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331
|| || || ||||| ||||||||||| |||||||| || || || ||||||| |||||
Sbjct 56726 CATCAACCCTGATGAGGCTGTTGCATACGGTGCTGCCGTCCAAGCTGCTATTTTGTCTGG 56667
Query 350332 AAATAAGAGTTC---TAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCT 350388
| | ||| || | | || | | | || ||||| | ||||| || |
Sbjct 56666 ---CGACACTTCAGAAAAGACCCAGGACTTGCTCTTGCTCGATGTTGCACCACTCTCTAT 56610
Query 350389 TGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACC 350448
|| | || ||| | |||| || ||||| || ||| | | || | || | ||
Sbjct 56609 GGGTATTGAGACTGCCGGTGGTGTGATGACACCCCTCATTACACGCAACACGACGATTCC 56550
Query 350449 TACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCA 350508
|||||| ||||| | || |||||||| | || || ||||| | || |||||
Sbjct 56549 TACAAAGAAGTCGGAGACCTTTTCTACCTACAGCGACAACCAGCCTGGTGTGTTGATTCA 56490
Query 350509 AGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCT 350568
|| ||||||||||| ||||| || || || || || || || | ||| | |
Sbjct 56489 GGTGTTTGAAGGTGAGCGTGCACGTACCAAGGACTGCAACTTGCTCGGCAAGTTTGACTT 56430
Query 350569 AAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGA 350628
| || |||||||| ||| | || ||||| |||||||| || | || ||| | ||
Sbjct 56429 GACTGGTATTCCACCTGCTCCTCGTGGTGTTCCACAGATTGAGGTGACATTTGATGTGGA 56370
Query 350629 T 350629
|
Sbjct 56369 T 56369
Score = 161 bits (178), Expect = 3e-34
Identities = 553/855 (65%), Gaps = 8/855 (1%)
Strand=Plus/Plus
Query 182940 TCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTT 182999
|| |||||||||| || ||||||||||||||||| || || |||||||| |||||
Sbjct 56370 TCCACATCAAATGTCACCTCAATCTGTGGAACACCACGAGGAGCAGGTGGAATACCAGTC 56429
Query 183000 AAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACT 183059
|| ||| | || | || || || || | ||| | ||| |||||| | ||
Sbjct 56430 AAGTCAAACTTGCCGAGCAAGTTGCAGTCCTTGGTACGTGCACGCTCACCTTCAAACACC 56489
Query 183060 TGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATA 183119
||||| || | ||||| || || || || |||||||| | | || || ||
Sbjct 56490 TGAATCAACACACCAGGCTGGTTGTCGCTGTAGGTAGAAAAGGTCTCCGACTTCTTTGTA 56549
Query 183120 GGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCT 183179
||||| || | || || | || | ||||| || | | |||||| || | ||
Sbjct 56550 GGAATCGTCGTGTTGCGTGTAATGAGGGGTGTCATCACACCACCGGCAGTCTCAATACCC 56609
Query 183180 AATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTTATCTGATTTAATATCA 183239
| || | |||||| ||||| || || | || || || || ||||| | ||
Sbjct 56610 ATAGAGAGTGGTGCAACATCGAGCAAGAGCAAGTCCTGGGTCTTTTCTGAAGTGTCGCCA 56669
Query 183240 CTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAA 183299
||||| |||||||| || || ||||| ||||||||||| ||||| ||||| | ||
Sbjct 56670 GACAAAATAGCAGCTTGGACGGCAGCACCGTATGCAACAGCCTCATCAGGGTTGA-TGGT 56728
Query 183300 CGAGAT-AATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCT 183358
| | | | || ||||| || || || || || | | | || | ||| || |
Sbjct 56729 CTTGTTGAGCTCCTTGCCGTTGAAGAAGTCAGAGACAAGCTTCTGGACACGTGGGATACG 56788
Query 183359 AGTTGAACCACCGACTAATACTACTTCATCGATATT--ACTTTTACTAATTTGTGAATCT 183416
|| || ||||| || | || | ||||| | | | |||| | | || | | |||
Sbjct 56789 GGTCGATCCACCAACAAGCACAATCTCATCCACACTCGACTTGTCC--ATCTTGGCATCA 56846
Query 183417 TTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCT 183476
|| || || |||||||| ||||| || | || || ||| ||| | ||| ||
Sbjct 56847 CGCAACACCTTCTCAACAGGCTCCATGGTACCGCGGAACAAGTCTGCACAAAGCTCCTCG 56906
Query 183477 AATCTTGCTCTAGTTAAAGAT-GaaaaaaaGTCAATACCATTATATAAGGAATCAATTTC 183535
|| || || | | ||| | | | ||||||| | || | | | | || ||||| ||
Sbjct 56907 AACCTGGCACGCG-TAATGCTGGTGTAAAAGTCGGTTCCCTCAAAGAGCGAGTCAATCTC 56965
Query 183536 AATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAG 183595
||||||||| |||| ||||| || | ||| | || || || || || || || | |
Sbjct 56966 AATCGATGTCTGTGCCGATGAGGAAAGTGTACGCTTGGCACGCTCGCAAGCAGTACGCAA 57025
Query 183596 TCGACGTAATGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGT 183655
||||| | | | | ||| || | ||| | || || | || || |||||
Sbjct 57026 ACGACGCAGAGCACGAGCATTTGTAGTCAAATCCTTCTTGAACTTGCGCTTGAACTCAGT 57085
Query 183656 AATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGC 183715
|| ||| || | | | ||||| ||||||||||| | |||||| || || ||
Sbjct 57086 GCAGAAGTGTGTAACGAGACGGTTGTCAAAGTCTTCACCACCGAGATGTGTGTCACCGGC 57145
Query 183716 AGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACC 183775
||||| || || ||||| || || |||||||| | | | ||||||||||| |||||
Sbjct 57146 AGTAGACTTGACCTCAAAGATGCCATCTTCAATGGTGAGGAGCGATACATCAAAGGTACC 57205
Query 183776 ACCACCCAAATCAAA 183790
|||||||||||| ||
Sbjct 57206 ACCACCCAAATCGAA 57220
>seq43
Length=605699
Score = 170 bits (188), Expect = 6e-37
Identities = 181/236 (77%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || ||||| || || || ||||| || |||||||| |
Sbjct 451100 TTTGCATACCACCACGGAGACGGAGGACAAGGTGGAGGGTTGACTCCTTCTGAATATTGT 451159
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | || || || ||||| ||||| || || |||||||| || ||||| |||||||
Sbjct 451160 AGTCGGCCAAAGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGAT 451219
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
|||| ||||| || || || |||||||| || ||| || ||||| ||||| | || |||
Sbjct 451220 CAGGTGGAATGCCCTCCTTGTCCTGAATCTT-GCTCTTGACATTGTCAATGGTGTCTGAT 451278
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| ||||| || ||||| | |||||||| || || || || ||||| ||||||||
Sbjct 451279 GACTCAACCTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 451334
Score = 158 bits (174), Expect = 4e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || ||||| || ||||| ||||| || || || || || ||
Sbjct 451332 CATACCACCACGAAGACGGAGCACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTC 451391
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| | ||| || ||||||||||| || || ||||| || || | ||| ||||| || ||
Sbjct 451392 TGCAAGTGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAAACGCTGCTGGTCCGG 451451
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| ||||| || ||||||||||| | || ||||| ||||| | || || | |||
Sbjct 451452 TGGAATCCCTTCCTTGTCCTGAATTTTCGACTTGACATTGTCAATGGTGTCTGAGGATTC 451511
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCT 140733
||| ||||| |||| ||||| || || ||||| || ||||| ||||
Sbjct 451512 AACCTCAAGGGTAATGGTCTTGCCAGTAAGTGTCTTGACAAAGATCT 451558
Score = 149 bits (164), Expect = 2e-30
Identities = 176/236 (75%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||||||||| || | | || ||||| || ||||| ||||| || || ||||| |
Sbjct 450644 TTTGCATACCACCGCGGAGACGGAGCACAAGGTGGAGAGTTGACTCCTTCTGGATATTGT 450703
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | | || || || || ||||| || || |||||||| || ||||| ||||| |
Sbjct 450704 AGTCTGCAAGCGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGT 450763
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGAT 140681
|||| ||||| || || || || ||||| || ||| || || || ||||| | || |||
Sbjct 450764 CAGGTGGAATGCCCTCCTTGTCTTGAATCTT-GCTCTTGACGTTGTCAATGGTGTCTGAT 450822
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| ||| ||||| ||||||| |||||||| || | || || || |||||||||||
Sbjct 450823 GATTCGACTTCGAGTGTAATGGTCTTTCCAGTCAAAGTCTTAACGAAAATCTGCAT 450878
Score = 134 bits (148), Expect = 4e-26
Identities = 150/198 (76%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600
|| ||||| || ||||| || || || | || || || ||||| ||||| || ||||||
Sbjct 450454 GTTGACTCCTTCTGAATGTTGTAGTCGGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCA 450513
Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TT 140659
|||||||| ||||| ||||| ||||| ||||| ||||| || || ||||| || ||| ||
Sbjct 450514 GCAAAGATGAGACGCTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTT-GCTCTT 450572
Query 140660 TACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
|| || ||||| | || |||| || || || ||||| | |||||||| || || ||
Sbjct 450573 GACGTTGTCAATGGTGTCTGATGACTCTACCTCGAGTGTGATGGTCTTTCCAGTCAGAGT 450632
Query 140720 TTTTACAAAAATCTGCAT 140737
|| || ||||| |||||
Sbjct 450633 CTTGACGAAAATTTGCAT 450650
>seq3
Length=560494
Score = 150 bits (166), Expect = 5e-31
Identities = 269/392 (69%), Gaps = 3/392 (1%)
Strand=Plus/Minus
Query 349523 CAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAA 349582
||||| ||||||||| ||||| | ||||| | | ||| |||||||||| || ||
Sbjct 200173 CAATTCACACCCGAAGAGATTTCCGCCATGGTGCTCGGTAAGATGAAGGAAACGGCAGAG 200114
Query 349583 GCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGAT 349642
| | ||| || | | || || ||||||| | || || || ||||| || || |||
Sbjct 200113 TCCTTTTTGGGACACGCCGTGACCCATGCTGTGGTGACAGTGCCGGCCTACTTCAACGAT 200054
Query 349643 GCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATG 349702
|| || | || || || ||||| || | ||| |||| | ||||| | ||||
Sbjct 200053 GCTCAAAGGCAAGCCACCAAGGATGCCGGTACCATCTCGGGTCTCAATGTCATTCGAATT 199994
Query 349703 ATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaa 349762
| ||||||||||| || || || ||||| ||||| || || || | | ||| | |||
Sbjct 199993 GTCAATGAACCCACGGCGGCTGCCATTGCCTATGGACTCGACAAGAAGGGTG---ATGAA 199937
Query 349763 aaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTT 349822
|| ||| | | | |||| | ||||||||||| |||||||| || || || | ||
Sbjct 199936 CGCAAGATTATCGTGTATGATCTCGGTGGTGGTACCTTTGATGTCTCCCTCCTCTCCATT 199877
Query 349823 GAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGAT 349882
||||| || | |||||||| ||||| | ||||| || || || ||||| |||||
Sbjct 199876 GAAGAAGGTGTGTTTGAAGTCCTTGCAACCTCCGGTGACACCCACCTCGGTGGTGAAGAC 199817
Query 349883 TTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914
||||| || || || || || ||||| ||
Sbjct 199816 TTTGACAACCGCGTCATTGACCACTTTGTCAA 199785
>seq40
Length=667070
Score = 109 bits (120), Expect = 2e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
||||| ||||| | | || || || || ||||| ||||| || || || || || ||
Sbjct 1507 ATACCTCCACGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCT 1448
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
| | || || || || || || || || ||||||||||| ||||| ||||| |||||
Sbjct 1447 GCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGC 1388
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
|| || ||||| || ||||| ||||| | || ||||| || || | || || | ||
Sbjct 1387 GGGATGCCTTCCTTGTCCTGGATTTTCGACTTGACATTGTCGATTGTGTCTGAGGACTCG 1328
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || | ||||| || || || || || || || || |||||
Sbjct 1327 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCAT 1278
>seq5
Length=451031
Score = 105 bits (116), Expect = 2e-17
Identities = 444/691 (64%), Gaps = 29/691 (4%)
Strand=Plus/Plus
Query 349216 AGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT------GTAGAAATAAT 349269
||| || ||||| || ||||| | ||| |||||| ||||| | || || || ||
Sbjct 83936 AGGCACGACTTACTCCTGTGTGGGTGTATGGCAAGATGATTCTCCCAATGTCGAGATTAT 83995
Query 349270 TGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCG 349329
|| || || ||| | | ||||| || |||||||| || ||||| || |||||
Sbjct 83996 CAGCAACGACCAGGGTGCCCGTACAACCCCTTCATACGTCGCTTTTACAGATGAAGAGCG 84055
Query 349330 TATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGA 349389
| | |||| || || || || || || || ||| || || || || || || ||
Sbjct 84056 TCTCGTTGGAGACTCGGCCAAGAACCAGGCCGCTATGAACCCTCGCAACACCGTATTCGA 84115
Query 349390 TGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC--AAATCTACACAATCTGATCTAAAA 349447
|| ||||| |||||||| | ||| |||| | | | || | | || | | ||
Sbjct 84116 CGCAAAGCGCCTTATTGGCCGTCGTTACGATGACGCAGAGGT-CA-AGGCAGA-CAAGAA 84172
Query 349448 CATTTT-CCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATA 349506
| | ||||| | ||| || | | || || | | || |||||||| || ||
Sbjct 84173 GGTCTGGCCTTTCAATGTCGTGG---ATGCCGATGGTCAGCCTCAAATTGAGGTCGAGTA 84229
Query 349507 TAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAAT 349566
||||| | || ||||| ||| | || || || | ||||| | || || ||
Sbjct 84230 CCTCGGTGAGAAGAAGCAATTCACACCTCAGGAGATCTCTGCCATGGTCCTCGTCAAGAT 84289
Query 349567 GAAGGAAATTGCTGA-AGCATATTTAGGTGAAACAGTAACTG----ATGCTGTTATTACT 349621
|||||| ||||| || | || || | || || | | | || |||||||||
Sbjct 84290 GAAGGAGATTGCAGAGACCA-----AGCTCAACAAGAAGGTTGAGAAGGCCGTTATTACT 84344
Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681
|| || ||||| ||| || | |||||| | || || || ||||| || ||||||
Sbjct 84345 GTGCCTGCCTACTTTTCCGACTCTCAGCGTACCGCCACCAAGGATGCCGGTGCCATTGCC 84404
Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741
|| | || || || | || || || || || ||||| || || ||||| || || ||
Sbjct 84405 GGACTCAACGTCCTCCGTATCATCAACGAGCCAACTGCCGCCGCCATTGCTTACGGTCTC 84464
Query 349742 GATAA--AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799
|| | | || || | || || ||| |||| ||||| || | || ||||||||||
Sbjct 84465 GACCAGCGTTCAGAGA--AGGAGAAGAATGTTCTCATTTTCGACCTCGGAGGTGGTACTT 84522
Query 349800 TTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859
| ||||| || | || || | | | || | || | ||||| || ||||| || |
Sbjct 84523 TCGATGTGTCCATCCTGACCATCCAGGGTGGTGTCTTCCAGGTTAAGGCCACTGCCGGAG 84582
Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATAA 349890
| || ||||| ||||| || || ||||| ||
Sbjct 84583 ACACTCATCTCGGTGGTGAGGACTTTGACAA 84613
>seq14
Length=253719
Score = 87.8 bits (96), Expect = 5e-12
Identities = 180/266 (68%), Gaps = 4/266 (2%)
Strand=Plus/Minus
Query 378183 ATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGT 378242
|||||| |||| | ||| || | || || | ||| || || ||||||||| ||
Sbjct 132909 ATCATAGTTAACACCGACATCCTCGAGCGCCTTGACAAGACGACGCTGAATATAACCTGT 132850
Query 378243 TTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAA 378302
| ||| || || || |||||||| | ||| ||||||| |||| |||||||||||
Sbjct 132849 CTCGGCAGTCTTGACGGCTGTATCAATCAGACCTTCACGACCGGCCATGGCATGGAAGAA 132790
Query 378303 TAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCT-- 378360
||||| || || | |||| | | ||| |||| | |||||| | ||| ||
Sbjct 132789 GAATTCTTGTGGTGTCAAACCACGCAGGTAAGAATTCTCCACAAATCCAC--GCGACTCG 132732
Query 378361 GGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATT 378420
|| || | |||| |||||| | || || || || || || || ||||| ||||||
Sbjct 132731 GGTGAGTAGTCATCCTTTGTAAAGTGCGGCAACGTGCGGAACTTGAAGCCATAGGGAATT 132672
Query 378421 CGTTTTCCATCAACATTCTGTTGACC 378446
|| ||||| || || | || |||||
Sbjct 132671 CGCTTTCCTTCCACCATTTGCTGACC 132646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253545775332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |