Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq43 113 4e-20
>seq43
Length=605699
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || |||||||| || ||| | || || || || || || | ||
Sbjct 450650 ATGCAAATTTTCGTCAAGACTCTGACTGGAAAGACCATCACACTCGAGGTAGAGTCATCA 450591
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||||||||| ||||| || ||||| || ||
Sbjct 450590 GACACCATTGACAACGTCAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 450531
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || || || || | || || || || | |||| ||||||
Sbjct 450530 CAGCGTCTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTTTGGCCGACTACAAC 450471
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||||| || || || ||||| |||||| | || || ||
Sbjct 450470 ATTCAGAAGGAGTCAACATTGCACTTGGTGTTGCGTCTTCGTGGAGG 450424
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| |||| || ||| | ||||| || ||||| ||| | ||
Sbjct 450878 ATGCAGATTTTCGTTAAGACTTTGACTGGAAAGACCATTACACTCGAAGTCGAATCATCA 450819
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||||||||| || ||||| ||||| || ||
Sbjct 450818 GACACCATTGACAACGTCAAGAGCAAGATTCAAGACAAGGAGGGCATTCCACCTGACCAG 450759
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || ||||| || | || ||| | || || | || |||||
Sbjct 450758 CAGCGTCTCATTTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACGCTTGCAGACTACAAT 450699
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | || | || | ||| | || ||||| ||
Sbjct 450698 ATCCAGAAGGAGTCAACTCTCCACCTTGTGCTCCGTCTCCGCGGTGGTAT 450649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918160794880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |