Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007-
11-09] 4 sequences; 12,591,251 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 293 3e-74
seq2 262 5e-65
>seq1
Length=5579133
Score = 293 bits (324), Expect = 3e-74
Identities = 1395/2195 (64%), Gaps = 39/2195 (2%)
Strand=Plus/Minus
Query 64869 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 64928
||||| |||||||||||||| || || ||||| |||| || ||||| ||||||||
Sbjct 4229516 GTACGAAGATAGTACATTCCAGTCTTAAGACCCTTCTTCCAGCCATAAAAGTGCATACTA 4229457
Query 64929 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 64988
|| | ||| || ||||| | || || |||| | ||| |||||| |||
Sbjct 4229456 GTAATTTTTCCGTAGGAAGGATCCTTCAAGTGAATGTTCAAACTTTGGGATTGATCAATG 4229397
Query 64989 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 65048
|| | || | ||| ||||| | || | |||||||| ||| ||||| | |||
Sbjct 4229396 AATGGGCCACGGTCGGCAGCATAGTCAATAACAGTCTTTTGACTAATCTCCCATACGGTT 4229337
Query 65049 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTATTC---TGAATGGATCCACCATCT 65105
|| |||| ||||| |||| |||| | | | || || ||||||||| ||
Sbjct 4229336 TTGTAAAGATCCTTAAGGTCTTGAGGAATTTCAGGAATCGCTTGGATGGATCCATCAAGC 4229277
Query 65106 GCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 65165
| || | ||||| || || |||||||| || | | ||| | | | | |
Sbjct 4229276 ATAACAAGTTTGTTCTTCATGTCCTCATTCCACAAATCACGCTCAACGAGATCCTTCAAC 4229217
Query 65166 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 65225
|| ||||| || | ||| ||||| ||||| | || | || ||| || |||
Sbjct 4229216 AGCCATGGATTGACAATTTGGAATTCACCAGAAAGAACACGGCGTTGGTACATGTTAGAA 4229157
Query 65226 GTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 65285
||||| || || | | ||||||| || | ||||||| ||||| ||||| |||||
Sbjct 4229156 GTATATGGCTCAAAACACTCATTGAAACCAAGGATTTGAGATGTTGAAGCAGTAGGCATT 4229097
Query 65286 GGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCC 65345
||||| || || ||| ||| | || |||| | | || || || || | ||
Sbjct 4229096 GGTGCTACTAACAAAGAATTACGAATTCCGTGTTTAGCAATCTTTTCCTTCAACTCGGCC 4229037
Query 65346 CAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTG 65405
|||| ||||||||| | || ||| |||| |||||| |||
Sbjct 4229036 CAATCCCAAAGATCGGTGGGATTAACGTTCCACATGTCATACTGTAAAATACC----CTG 4228981
Query 65406 GCGTAC----GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACT 65461
| | | |||||| |||| | || |||| || || || || | || |||
Sbjct 4228980 GGATGCAGGAGATCCTTCATAACTCTCATATGTACCCTCTACCTGGGCAATCTCGCAAGA 4228921
Query 65462 CGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGTG-CT 65519
||||| | || ||| ||||| ||||||||||| | | ||||| | |||| |
Sbjct 4228920 GGCCTCAAGGGCTGCGTGGTAAATTGTTTCGAAGATTTGGATGTTTAGCTTCTTGGCACC 4228861
Query 65520 TCCAGGCTATCAAATGGATAATTTAAGAG--AATAAACGCGTCTGCTAATCCTTGAACAC 65577
| ||| | | ||||| ||| ||||| || ||| || || || | ||||||||||
Sbjct 4228860 TGCAGATT--CGAATGG-TAAACGAAGAGCGAAGAAA-GCATCGGCAAGACCTTGAACAC 4228805
Query 65578 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC-AGCTTCTGGAATAGGATAATAA 65636
| | ||| | || | ||| | | |||| | | | |||||| |||| |||||||||
Sbjct 4228804 CCAAACCAACGGGACGATGGCGCATATT-GCTACGGCGAGCTTCAGGAACAGGATAATAG 4228746
Query 65637 TTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAG-TTT 65695
|||| || ||||| || ||||| || | || || || || ||||| | || |||
Sbjct 4228745 TTAACGTCGATAATCTTGTTGAGGTTACGAGTAACGACCTTCACGACATCGTGAAGCTTT 4228686
Query 65696 GAGAAAATCAAATCGCTCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACA 65755
|||| | | | | | ||| | | ||| || ||| ||||| || || || |||||
Sbjct 4228685 TGGAAATTGTACTTTC-CGTCTTTAATAAATGTGGGCAAAGCAACTGAAGCAAGGTTACA 4228627
Query 65756 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 65815
||| || || || | || | | |||| | |||||||| || || || ||
Sbjct 4228626 AACAGCAACTTCGTCAGGAGAAGAGTATTCAACAATCTCAGTACACAGGTTTGAGCAGCG 4228567
Query 65816 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 65875
|| || || | ||| | ||||| ||| ||| || | ||||||||| | |||||
Sbjct 4228566 AATAGTACCAACATTCTTCTGATTGGACTTACGGTTGCATGAATCCTTATACAACATGAA 4228507
Query 65876 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT 65935
||| |||||||||||| || |||| | ||| || | ||| || | |||| ||
Sbjct 4228506 AGGATTACCAGTTTCAACTTGTGATTGAAGAATGGCGTACCAAACTTTTTGAGCAGGTA- 4228448
Query 65936 TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTA--TACAATCGTTCGAACTCGTCT 65993
|| | | | | ||||| ||| ||| | | || | | ||||||||
Sbjct 4228447 -ATGAACGACGACCACGGTTCTCCTTCTCATACTTTTCGTAGAGGGCAACAAACTCGTCA 4228389
Query 65994 CCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCA 66053
|||||||||| |||| || ||| |||| || || | || | ||| | ||| |
Sbjct 4228388 CCCCAAACATCTGCCAAACCTGGAGCCTCATTGGGGCAGAAGAAGGTCCATTGCTCGTTA 4228329
Query 66054 TCCTTCA-CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGT 66112
| |||| | |||| |||||| | ||||||||||| | || ||| | | || || ||
Sbjct 4228328 -CGTTCAACACGTTGCATAAACAAGTCAGGAATCCACAAGGC-ATAGA-ACATTTCGCGT 4228272
Query 66113 TCTATGT--TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAA 66170
| | |||||||| || | ||||| ||| || | || |||||| ||| |
Sbjct 4228271 GCGCGGAAATCCTCGTTGCCATGAGTCTTTCGAAGTTCTAAAAAGTCCATAACATCGGCA 4228212
Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230
||||| || ||||| || || | | ||||| || || || ||||| || || |
Sbjct 4228211 TGCCAAGGCTCCAAATAGGCTGCAAAGGCACCAGGACGCTTATTACCTCCTTGGTCAACA 4228152
Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290
|| | ||| ||||| || ||||| | | ||| || | ||| || ||||| ||||||||
Sbjct 4228151 TAACGAGCTGTGTTGTTGTAAACACGAATCATGGGGACAATTCCGTTGGAAGTACCATTA 4228092
Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCT 66350
|| || | ||||| || |||| | ||| || ||| | ||| || || ||
Sbjct 4228091 GTTCCAGCAATATACGAACCGGTTGCTCTAATGTTGTGAATATTAATACCAATACCGCCA 4228032
Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410
|| | || ||||| | || || || | || || ||||| || || ||| ||
Sbjct 4228031 GCGGTCTTGGAGATCATAGCACACATCTTGAGTGTGTCGTAGATTCCTTCAATAGAGTCG 4227972
Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 66470
|| |||| ||| || ||||| ||| | |||| ||||| ||| || ||||| ||
Sbjct 4227971 TCTTTCATCGTAACGAGGAAACAAGAAGAGAGTTGGGGACGAGGAGTACCGGCATTGAAA 4227912
Query 66471 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 66530
| || || ||||| || ||||| | || ||| | | |||||| || ||||||||
Sbjct 4227911 AGAGTTGGTGAAGCATGGGTAAAGTAGCGTTGAGACATCAAATTGTATGTTTCAATAGCA 4227852
Query 66531 GAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 66589
| || || ||| || | || || || || ||||||||||| | ||| |||||||| |
Sbjct 4227851 GCTTCAATGTCCTCACCG-TGGATACCAACGGCGACACGCATAATCATATGCTGAGGGCG 4227793
Query 66590 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649
||| | | ||| || || ||| || || || || ||||| || || |||||
Sbjct 4227792 CTCAGCAACTTTGCCGTCGATACGCAATAAATAAGAACGCTCTAAAGTCTTGAAGCCAAA 4227733
Query 66650 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 66709
| ||||| | || || || ||||| || ||| | | | || ||||| | |||
Sbjct 4227732 GAAATTGTAAGTGAAATCACGATCGTATATGATAGCACTATCTAATTCGTCCTTGTGTTT 4227673
Query 66710 GTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 66769
| || | ||| | | | || || || || | | | || | |||| |||||
Sbjct 4227672 CATTACGATATCGTAGATTTTGTCAGAGATCATGGGGGCAGGCTTGTCTGTTTTGGGATT 4227613
Query 66770 GACATAGT--TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGT 66827
||||||| |||| | | || || | ||| | || | |||| || ||
Sbjct 4227612 TACATAGTCATGAAGCTGTTGAACGACAGTTGA--AAACACCTTCTCGGTTTGCTTATGC 4227555
Query 66828 AGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAA 66887
| || || || || |||||||| || | ||| |||||||| ||||| | |||||| |
Sbjct 4227554 AAGTTGGAAACAGCAATTCTAGCAGCCAAAATAGCATAATCAGGATGCTTTGTAGTCATA 4227495
Query 66888 GTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATT 66947
|| || || |||| || || | | | |||||||| | || || || || ||| |
Sbjct 4227494 GTCGCGGCAGTTTCAGCAGCTAAATTATCCAATTCAATAGTGGTAACACCGGGATACACA 4227435
Query 66948 CCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAA 67007
|| || || || || |||| | ||||| | |||||| | | | |||||||
Sbjct 4227434 CCAGAAATGACTTTTTGAGTGATTTCGACGGGATCAACATGATCGGAATCAAGGCCATAA 4227375
Query 67008 CATAATTTTCTAATACGAGATGTGATTTTATCAAA 67042
|| | | || ||||| |||||||| |||||
Sbjct 4227374 CAAAGCCTCGAAACACGAGCAGTGATTTTGTCAAA 4227340
>seq2
Length=4539804
Score = 262 bits (290), Expect = 5e-65
Identities = 599/895 (67%), Gaps = 10/895 (1%)
Strand=Plus/Minus
Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911
|||||||| || ||||||| ||| || ||||| || ||||| ||||| |||
Sbjct 3722872 GACATAACGCCAGCAATTTGGTAGTCAGAAACTTTCTTTTCAAAGAAATTTGTTTTTCCT 3722813
Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971
|||| || ||||| |||||||||||||| |||||| | || ||||| || | |
Sbjct 3722812 GCTAAAGAGATATTCTCCATGAAATCGAAAGGATTGGTTACGTTATAGTACTTGTCATTG 3722753
Query 35972 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 36031
||||| || | ||| | ||| || |||||||| ||||| ||||| || |
Sbjct 3722752 CCCAAAGCAACCAACAAACGATCAGCAACAAATTCAATATACTGACACATCAAATCCTTA 3722693
Query 36032 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 36091
||||| || | || |||| |||||||| | || | |||||| |||||| ||
Sbjct 3722692 TTCATACCAAGCAGACTAACGGGAAGAGCGTCCGTGAAGTATTCTTTCTCAATATCAACA 3722633
Query 36092 GCGTCTGTTATAATAGATATTACTG--TTTCTTCACTCGGTGGATACAATAAATGTTTAA 36149
|| || ||||| | | || || | | || ||| | | ||||| |||
Sbjct 3722632 GCTTCAACAATAATGGCTTCAACAACCTTGCGGC-CT-GGTCTGTGCTTCAAATGACTAA 3722575
Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209
|||||||||| || || ||| ||| |||||||| || | || ||| ||||| |||||||
Sbjct 3722574 ACATCAAACAGGCAAAGTCGGTGTGAAGACCCTCATCACGACAAATCAATTCATTGGAAA 3722515
Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 36269
| || || || ||||| || ||||| || ||||||||||| || || ||||| |||||||
Sbjct 3722514 AAGTAAGACCAGGCATAAGTCCACGTTTCTTAAGCCAAAAAATAGAGGCAAACGATCCAG 3722455
Query 36270 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA-CT- 36327
||||||| || |||||||| || |||||||||| | | | |||| || | ||
Sbjct 3722454 AAAAGAAGATACCTTCTACAGCAGCAAAGGCAACCAAACGAATTGCATAGGTGGAATCTT 3722395
Query 36328 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 36386
|||| ||||| ||||||| | ||| || || | | || |||||| |
Sbjct 3722394 CATCATTAATCCAACGAAGAGCCCACTTGGCTTTGGCCTTAATAGAACCCATTGTTAAAA 3722335
Query 36387 TAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGAC 36446
|||||| || || | |||||| ||| || || |||||||||| ||||||
Sbjct 3722334 TAGCATCGAAATGACGCTGTTTTTCCTTAGGTTCACGAATGTATGTATCAAGCAAAAGTG 3722275
Query 36447 TATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCT 36506
|| | || || ||||| |||||||| ||||| || || || | ||| | ||| |
Sbjct 3722274 AGTAGGTCTCAGAGTGAATATTTTCAATCATAATTTGGAAACCATAAACACAACGAGCTT 3722215
Query 36507 CGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 36566
| | ||||| ||||| | | || || || | ||| ||||| || || || ||
Sbjct 3722214 CAGGGATCTGAACTTCAGAGCTGAAACGCTCGAGAAGATTCTCATTAACAATACCATCTG 3722155
Query 36567 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTA---GTT 36623
|| || ||| | || | |||| ||||| || ||| | | ||| |
Sbjct 3722154 ACGCAGCGAAATAGGCGAGTACAGTGGAAATAAAGTAACGTTCATCAGCATTTAACTTGT 3722095
Query 36624 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 36683
||| ||||||| | ||||| || | ||| | ||| || | |||||||| ||||| |
Sbjct 3722094 TATCCCAATCAACCAAGTCTTTCGAAAGATCAATTTCCTCAGCAGTCCAAAAAGATGCTT 3722035
Query 36684 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
| ||||| || || | | ||| || || ||||| | ||||||||| | ||||||
Sbjct 3722034 CAGCCTTCTTGTAGAATTGCCAAATTTCGTGATACTTAATTGGAAACAAAACAAA 3721980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172767091360
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