Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 2e-13 >seq1 Length=5579133 Score = 91.5 bits (100), Expect = 2e-13 Identities = 173/252 (69%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || ||||| || ||||| | ||||| || || ||| || | ||||||| | ||| Sbjct 4720324 AAATTTGAGGACATGGGCATTGGTGGTCTTGACTCAGAGTTCAGTGCTATTTTCCGTCGA 4720265 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 |||||||| ||| | ||||| | || | |||| | || ||| ||| | Sbjct 4720264 GCATTTGCCTCTCGTCTCTTTCCTCCTGGCATGGTTGAAAAGCTGGGTATTAATCATGTT 4720205 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 || || ||| | ||| |||| ||||| ||| ||||| |||||||| |||||| ||| Sbjct 4720204 AAGGGTATTCTCTTATATGGCCCTCCAGGTACTGGTAAGACATTAATTGCTCGACAAATT 4720145 Query 164578 GCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAAC 164634 | | || | ||||| || || ||| ||||| ||||||||||||||| | | ||| Sbjct 4720144 GGTAAAA-TGCTAAATGCCCGTGAACCG--AAAATCGTTAATGGTCCTGAAATTCTAAAC 4720088 Query 164635 AAATATGTAGGT 164646 ||||| || ||| Sbjct 4720087 AAATACGTCGGT 4720076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871970206400