Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007-
11-09] 4 sequences; 12,591,251 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 2e-13
>seq1
Length=5579133
Score = 91.5 bits (100), Expect = 2e-13
Identities = 173/252 (69%), Gaps = 6/252 (2%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| ||||| || ||||| | ||||| || || ||| || | ||||||| | |||
Sbjct 4720324 AAATTTGAGGACATGGGCATTGGTGGTCTTGACTCAGAGTTCAGTGCTATTTTCCGTCGA 4720265
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|||||||| ||| | ||||| | || | |||| | || ||| ||| |
Sbjct 4720264 GCATTTGCCTCTCGTCTCTTTCCTCCTGGCATGGTTGAAAAGCTGGGTATTAATCATGTT 4720205
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
|| || ||| | ||| |||| ||||| ||| ||||| |||||||| |||||| |||
Sbjct 4720204 AAGGGTATTCTCTTATATGGCCCTCCAGGTACTGGTAAGACATTAATTGCTCGACAAATT 4720145
Query 164578 GCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAAC 164634
| | || | ||||| || || ||| ||||| ||||||||||||||| | | |||
Sbjct 4720144 GGTAAAA-TGCTAAATGCCCGTGAACCG--AAAATCGTTAATGGTCCTGAAATTCTAAAC 4720088
Query 164635 AAATATGTAGGT 164646
||||| || |||
Sbjct 4720087 AAATACGTCGGT 4720076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871970206400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |