Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007-
11-09] 4 sequences; 12,591,251 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 1e-20
>seq1
Length=5579133
Score = 114 bits (126), Expect = 1e-20
Identities = 132/178 (74%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 154939 TTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGAC 154998
|||| || ||||||||||||| || ||||||| || || | |||||| ||| ||
Sbjct 183835 TTCACGAACATGGTGGTCAGGTTTACTTTGATGGTGCTAACATGAATGCAATGGTTGGTT 183776
Query 154999 TAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCT 155058
|| || | |||| |||||| ||||| ||||| |||| | ||||| ||||| |
Sbjct 183775 TATGCAAGGCTGGTGATATTGGTGCTGATGTTTGTCACTTAAATCTTCATAAGACATTTT 183716
Query 155059 GTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCT 155116
| ||||| || || ||||| |||||||| ||||||||||| ||||| ||| |||||
Sbjct 183715 GCATTCCTCACGGCGGTGGCGGTCCTGGTGTAGGTCCTATTTGTGTAAAAAAGCATCT 183658
Score = 86.0 bits (94), Expect = 7e-12
Identities = 131/184 (71%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 153246 ATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCT 153305
|| ||||| || ||||||||||| ||| ||||| || || ||||| ||||| |||
Sbjct 185597 ATTCAGCGTAATGTTCTTGAGAACCCTGAATGGTATACTCAATATACTCCATATCAGGCT 185538
Query 153306 GAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTT 153365
|| || ||||| || | ||||| || | | ||||| ||||| | || | || ||
Sbjct 185537 GAAATTTCTCAAGGGCGTCTGGAATCTATGATGAATTATCAAACCATGATTGCTGATCTC 185478
Query 153366 ACAGG-ATTACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGC 153424
||||| | | || |||| || || | || | ||||||| |||||| || | ||||||
Sbjct 185477 ACAGGTCTCAGCATTAGC-AATGCTAGTTTACTGGATGAAGGAACTGCTGCTGGAGAAGC 185419
Query 153425 AATG 153428
||||
Sbjct 185418 AATG 185415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212771039360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |