Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007-
11-09] 4 sequences; 12,591,251 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq2 152 6e-32
>seq2
Length=4539804
Score = 152 bits (168), Expect = 6e-32
Identities = 530/812 (65%), Gaps = 39/812 (5%)
Strand=Plus/Minus
Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966
|||| || |||||||| |||||| ||| || ||||| ||||| ||||| || ||||| |
Sbjct 3722835 TTTCAAAGAAATTTGTTTTTCCTGCTAAAGAGATATTCTCCATGAAATCGAAAGGATTGG 3722776
Query 36967 ATGTATTATATATAGTACTACATGATAATTCCTTCAGAAGCCTA-------TCCGCAACA 37019
| ||||| ||||| || | | || || | || | || ||||||
Sbjct 3722775 TTACGTTATA----GTACT---TGTCATTGCCCAAAGCAACCAACAAACGATCAGCAACA 3722723
Query 37020 AATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCA 37079
||||| || || | |||||| | || | || ||||||| || | || |||| ||
Sbjct 3722722 AATTCAATATACTGACACATCAAATCCTTATTCATACCAAGCAGACTAACGGGAAGAGCG 3722663
Query 37080 TCT-TGAAGAAATAGTTTTTCT-ATTATTACAGCATCTTTAACTATATTAAC---AATAA 37134
|| ||||| || | ||||| | ||| || || ||| ||| ||| | | || ||
Sbjct 3722662 TCCGTGAAG---TATTCTTTCTCAATAT--CAACAGCTTCAACAATAATGGCTTCAACAA 3722608
Query 37135 CTTCTTCAGT-TGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACAATGT 37193
| | | | | ||| | || |||| |||||| ||||| ||||| || ||
Sbjct 3722607 CCT-TGCGGCCTGGTCTGTGCTTCAAATGACTAAACATCAAACAGGCAAAGTCGGTGTGA 3722549
Query 37194 AAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtt 37253
| ||| ||||| | || ||||||||||| ||||| || | || ||||| | || | |
Sbjct 3722548 AGACCCTCATCACGACAAATCAATTCATTGGAAAAAGTAAGACCAGGCATAAGTCCACGT 3722489
Query 37254 tttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCA 37313
|| |||| |||||| || | ||||| |||||||||||||| |||||||| || || |||
Sbjct 3722488 TTCTTAAGCCAAAAAATAGAGGCAAACGATCCAGAAAAGAAGATACCTTCTACAGCAGCA 3722429
Query 37314 AATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAA 37373
|| || || | ||| | | | || ||| | |||| |||||| | |||
Sbjct 3722428 AAGGCAACCAAACGAATTGCATAGGTGGAATCTTCATCATTAATCCAACGAAGAGCCCAC 3722369
Query 37374 TCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCT 37433
| || || |||| | | | |||||| ||| || | || || | ||||||
Sbjct 3722368 TTGGCTTTGGCCTTAATAGAACCCATTGTTAAAATAGCATCGAAATGACGCTGTTTTTCC 3722309
Query 37434 TCACTATCTGTTATATAAGTATCAATTAGTAAACT--ATACATTTCAGAGTGAATATTTT 37491
| | || || || ||||||| | ||| | || | ||||||||||||||||
Sbjct 3722308 TTAGGTTCACGAATGTATGTATCAAGCA--AAAGTGAGTAGGTCTCAGAGTGAATATTTT 3722251
Query 37492 CAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATC-GTTAAAA 37550
|||| || || |||||||||| ||| | |||||||| | ||||| || | |
Sbjct 3722250 CAATCATAATTTGGAAACCATAAACACAACGAGCTTCAGGGATCTGAACTTCAGAGCTGA 3722191
Query 37551 AAC-CTCTTAGCTAAG-TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAA 37608
||| ||| | ||| || |||||||| || ||||| || || || | || || |
Sbjct 3722190 AACGCTC---GAGAAGATTCTCATTAACAATACCATCTGACGCAGCGAAATAGGCGAGTA 3722134
Query 37609 CATATTTTATAAAATGTCTTTCAT---CATTTGATAATTTTTTCCAATCATTAATATCTT 37665
|| ||||| | | ||||| ||||| | || | ||||||| | ||||
Sbjct 3722133 CAGTGGAAATAAAGTAACGTTCATCAGCATTTAACTTGTTATCCCAATCAACCAAGTCTT 3722074
Query 37666 TTGATAAATCAACTTCATCAACGGTCCAAAAA 37697
| || | ||||| ||| ||| | |||||||||
Sbjct 3722073 TCGAAAGATCAATTTCCTCAGCAGTCCAAAAA 3722042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592316770384160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |