Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2 152 6e-32 >seq2 Length=4539804 Score = 152 bits (168), Expect = 6e-32 Identities = 530/812 (65%), Gaps = 39/812 (5%) Strand=Plus/Minus Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966 |||| || |||||||| |||||| ||| || ||||| ||||| ||||| || ||||| | Sbjct 3722835 TTTCAAAGAAATTTGTTTTTCCTGCTAAAGAGATATTCTCCATGAAATCGAAAGGATTGG 3722776 Query 36967 ATGTATTATATATAGTACTACATGATAATTCCTTCAGAAGCCTA-------TCCGCAACA 37019 | ||||| ||||| || | | || || | || | || |||||| Sbjct 3722775 TTACGTTATA----GTACT---TGTCATTGCCCAAAGCAACCAACAAACGATCAGCAACA 3722723 Query 37020 AATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCA 37079 ||||| || || | |||||| | || | || ||||||| || | || |||| || Sbjct 3722722 AATTCAATATACTGACACATCAAATCCTTATTCATACCAAGCAGACTAACGGGAAGAGCG 3722663 Query 37080 TCT-TGAAGAAATAGTTTTTCT-ATTATTACAGCATCTTTAACTATATTAAC---AATAA 37134 || ||||| || | ||||| | ||| || || ||| ||| ||| | | || || Sbjct 3722662 TCCGTGAAG---TATTCTTTCTCAATAT--CAACAGCTTCAACAATAATGGCTTCAACAA 3722608 Query 37135 CTTCTTCAGT-TGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACAATGT 37193 | | | | | ||| | || |||| |||||| ||||| ||||| || || Sbjct 3722607 CCT-TGCGGCCTGGTCTGTGCTTCAAATGACTAAACATCAAACAGGCAAAGTCGGTGTGA 3722549 Query 37194 AAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtt 37253 | ||| ||||| | || ||||||||||| ||||| || | || ||||| | || | | Sbjct 3722548 AGACCCTCATCACGACAAATCAATTCATTGGAAAAAGTAAGACCAGGCATAAGTCCACGT 3722489 Query 37254 tttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCA 37313 || |||| |||||| || | ||||| |||||||||||||| |||||||| || || ||| Sbjct 3722488 TTCTTAAGCCAAAAAATAGAGGCAAACGATCCAGAAAAGAAGATACCTTCTACAGCAGCA 3722429 Query 37314 AATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAA 37373 || || || | ||| | | | || ||| | |||| |||||| | ||| Sbjct 3722428 AAGGCAACCAAACGAATTGCATAGGTGGAATCTTCATCATTAATCCAACGAAGAGCCCAC 3722369 Query 37374 TCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCT 37433 | || || |||| | | | |||||| ||| || | || || | |||||| Sbjct 3722368 TTGGCTTTGGCCTTAATAGAACCCATTGTTAAAATAGCATCGAAATGACGCTGTTTTTCC 3722309 Query 37434 TCACTATCTGTTATATAAGTATCAATTAGTAAACT--ATACATTTCAGAGTGAATATTTT 37491 | | || || || ||||||| | ||| | || | |||||||||||||||| Sbjct 3722308 TTAGGTTCACGAATGTATGTATCAAGCA--AAAGTGAGTAGGTCTCAGAGTGAATATTTT 3722251 Query 37492 CAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATC-GTTAAAA 37550 |||| || || |||||||||| ||| | |||||||| | ||||| || | | Sbjct 3722250 CAATCATAATTTGGAAACCATAAACACAACGAGCTTCAGGGATCTGAACTTCAGAGCTGA 3722191 Query 37551 AAC-CTCTTAGCTAAG-TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAA 37608 ||| ||| | ||| || |||||||| || ||||| || || || | || || | Sbjct 3722190 AACGCTC---GAGAAGATTCTCATTAACAATACCATCTGACGCAGCGAAATAGGCGAGTA 3722134 Query 37609 CATATTTTATAAAATGTCTTTCAT---CATTTGATAATTTTTTCCAATCATTAATATCTT 37665 || ||||| | | ||||| ||||| | || | ||||||| | |||| Sbjct 3722133 CAGTGGAAATAAAGTAACGTTCATCAGCATTTAACTTGTTATCCCAATCAACCAAGTCTT 3722074 Query 37666 TTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 | || | ||||| ||| ||| | ||||||||| Sbjct 3722073 TCGAAAGATCAATTTCCTCAGCAGTCCAAAAA 3722042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316770384160