Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007-
11-09] 4 sequences; 12,591,251 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 1e-11
>seq1
Length=5579133
Score = 86.0 bits (94), Expect = 1e-11
Identities = 179/258 (69%), Gaps = 8/258 (3%)
Strand=Plus/Minus
Query 221406 CGCAAGACTGCGTCA-GGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTC 221464
||||||| || ||| |||| |||||||| || || || ||||| |||| || ||
Sbjct 4228927 CGCAAGAG-GCCTCAAGGGCTGCGTGGTAAATTGTTTCGAAGATTTGGATGTTTAGCTTC 4228869
Query 221465 TTGGCCTCGGGAGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCT 221522
||||| | | ||| ||| || | ||| || | | ||||| | ||||| || || |
Sbjct 4228868 TTGGCACCTGCAGATTCGAATGGTAAACGAAG-AGCGAAGAAAG-CATCGGCAAGACCTT 4228811
Query 221523 GTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-GCTTCTGGCACGGGA 221581
| || || | ||| | ||| | || | | | ||| | |||| ||||| || || |||
Sbjct 4228810 GAACACCCAAACCAACGGGACGATGGCGCATATTGCTA-CGGCGAGCTTCAGGAACAGGA 4228752
Query 221582 TAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTC 221641
||| |||| |||||||| | ||||||||||| |||| | ||| || || || |||
Sbjct 4228751 TAATAGTTAACGTCGATAATCTTGTTGAGGTTACGAGTAACGACCTTCACGACATCGTGA 4228692
Query 221642 AGCTTCTGGTGATTGAAC 221659
||||| ||| |||| ||
Sbjct 4228691 AGCTTTTGGAAATTGTAC 4228674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844753557760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |