Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007-
11-09] 4 sequences; 12,591,251 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 6e-26
>seq1
Length=5579133
Score = 132 bits (146), Expect = 6e-26
Identities = 136/178 (76%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230
||||| ||| ||||| |||||||||||| |||||||| ||||| || || ||||| ||
Sbjct 183658 AGATGCTTTTTTACACAAATAGGACCTACACCAGGACCGCCACCGCCGTGAGGAATGCAA 183717
Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290
||||||||||| | ||||| ||||| ||||| |||||| |||| | || || |
Sbjct 183718 AATGTCTTATGAAGATTTAAGTGACAAACATCAGCACCAATATCACCAGCCTTGCATAAA 183777
Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA 138348
|| ||| |||||| | || |||||||| | || ||||||||||||| || ||||
Sbjct 183778 CCAACCATTGCATTCATGTTAGCACCATCAAAGTAAACCTGACCACCATGTTCGTGAA 183835
Score = 82.4 bits (90), Expect = 9e-11
Identities = 130/184 (71%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAAT-C 139917
|||||| ||| | || |||||| ||||||| | || | || || |||| || | | |
Sbjct 185415 CATTGCTTCTCCAGCAGCAGTTCCTTCATCCAGTAAACTAGCATT-GCTAATGCTGAGAC 185473
Query 139918 CTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATA 139977
|||| || || | || | ||||| ||||| | | || ||||| | || ||||| |
Sbjct 185474 CTGTGAGATCAGCAATCATGGTTTGATAATTCATCATAGATTCCAGACGCCCTTGAGAAA 185533
Query 139978 TCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCT 140037
| ||||| ||||| ||||| || || ||||| ||| ||||||||||| || ||||
Sbjct 185534 TTTCAGCCTGATATGGAGTATATTGAGTATACCATTCAGGGTTCTCAAGAACATTACGCT 185593
Query 140038 GTAT 140041
| ||
Sbjct 185594 GAAT 185597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998371050080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |