Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007-
11-09] 4 sequences; 12,591,251 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3 105 1e-16
>seq3
Length=2452883
Score = 105 bits (116), Expect = 1e-16
Identities = 178/255 (70%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
||||||||||||| |||||||| || | ||||||||| |||| | || ||| | |
Sbjct 1412845 TACTTGGTGACGGATTTGGTACCTTCGGTAACGGCGTGCTTGGCTAACTCACCGGGAAGA 1412786
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
|||| || || || |||||||| || |||| || ||| |||||| || ||
Sbjct 1412785 ATCAAACGAACAGCAGTCTGGATTTCACGGGAAGAAATAGTGGACTTCTTGTT-GTAAGC 1412727
Query 1485592 -GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
|| || | ||||| ||| | || || || | || |||||||| || |||||||
Sbjct 1412726 AGCAAGCTTGGAAGCCTCAGTGGCAATACGCTCAAAAATATCGTTGACGAAAGAGTTCAA 1412667
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||| ||| | || |||||| || || || ||||| || ||||| | |||||||||
Sbjct 1412666 GATACGCATGGCTTGGTTGGAAATACCAGTATCAGGGTGAACTTGCTTCAACACCTTGTA 1412607
Query 1485711 AACAAAGGACGAGTA 1485725
|| | |||| || ||
Sbjct 1412606 AATATAGGATGAATA 1412592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916245974501756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |