Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 105 1e-16 >seq3 Length=2452883 Score = 105 bits (116), Expect = 1e-16 Identities = 178/255 (70%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||||||||||| |||||||| || | ||||||||| |||| | || ||| | | Sbjct 1412845 TACTTGGTGACGGATTTGGTACCTTCGGTAACGGCGTGCTTGGCTAACTCACCGGGAAGA 1412786 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 |||| || || || |||||||| || |||| || ||| |||||| || || Sbjct 1412785 ATCAAACGAACAGCAGTCTGGATTTCACGGGAAGAAATAGTGGACTTCTTGTT-GTAAGC 1412727 Query 1485592 -GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 || || | ||||| ||| | || || || | || |||||||| || ||||||| Sbjct 1412726 AGCAAGCTTGGAAGCCTCAGTGGCAATACGCTCAAAAATATCGTTGACGAAAGAGTTCAA 1412667 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 ||| ||| | || |||||| || || || ||||| || ||||| | ||||||||| Sbjct 1412666 GATACGCATGGCTTGGTTGGAAATACCAGTATCAGGGTGAACTTGCTTCAACACCTTGTA 1412607 Query 1485711 AACAAAGGACGAGTA 1485725 || | |||| || || Sbjct 1412606 AATATAGGATGAATA 1412592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245974501756