Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq2 100 6e-16 >seq2 Length=4539804 Score = 100 bits (110), Expect = 6e-16 Identities = 169/239 (71%), Gaps = 7/239 (3%) Strand=Plus/Minus Query 299063 TCGTGGTGAATTTGAAGAACGCATCGACAATTTGCTAAAAGAA-CTAAAGAAACGTGAAA 299121 |||||||||||||||||| || ||| | | | |||||||| | |||||| |||||| Sbjct 3614315 TCGTGGTGAATTTGAAGAGCGTATCAAATCTGTTTTAAAAGAAGTTGAAGAAA-GTGAAA 3614257 Query 299122 AT---ACTATTGTTTTCATTGATGAAATTCATATTATGGTTGGGGCTGGTTCCGCAAGTA 299178 | | |||| | ||| | |||||||| ||| || | | || || ||||||| || Sbjct 3614256 CTCCCATTATTTTATTCGTAGATGAAATGCATCTTTTAATGGGCGCAGGTTCCGGTGGTG 3614197 Query 299179 ATGGTTCTATGGACATGAGCAATATGCTTAAGCCAGCACTTTCACGTGGTGAGATTC-GT 299237 | ||| |||||| |||| |||| |||||| ||| |||||||| || ||| | Sbjct 3614196 AAGGTGGCATGGACGCTGCCAATTTGCTGAAGCCAATGCTTGCACGTGGTAAGCTTCACT 3614137 Query 299238 GTAATTGGTGCAACAACATATGATGAATATCGTAAAAATATCGAGAAAGATAGTGCATT 299296 || |||||||| || || | | |||||| ||| | ||||| |||||| ||| || Sbjct 3614136 GT-ATTGGTGCTACTACTTTGGCTGAATACAAGAAATACATCGAAAAAGATGCTGCTTT 3614079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115171142847476