Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 >seq2 Length=4539804 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110051 TTTTCGAAAAAATTAGTTTTGCCCTCGAGAGATATATTATTCATAAACTCGAAAGGATTG 110110 ||||| || ||||| ||||| || | | ||| ||||| | ||| || |||||||||||| Sbjct 3722836 TTTTCAAAGAAATTTGTTTTTCCTGCTAAAGAGATATTCTCCATGAAATCGAAAGGATTG 3722777 Query 110111 ACAGTGTTAAAGTGTTTGTCGTAGCCCAATTCGAATAGCAATCGATCCGCCACAAATTCA 110170 |||| ||| ||||| | |||||| | | | ||| ||||| || ||||||||| Sbjct 3722776 GTTACGTTATAGTACTTGTCATTGCCCAAAGCAACCAACAAACGATCAGCAACAAATTCA 3722717 Query 110171 ATATACTCGCACATGGACTGTACGTTCATGCCTAACATGGCAACTGGTAGAGCGGTAGTa 110230 ||||||| ||||| | | ||||| || | || ||| || |||||| || Sbjct 3722716 ATATACTGACACATCAAATCCTTATTCATACCAAGCAGACTAACGGGAAGAGCGTCCGTG 3722657 Query 110231 aaaaaaTCCTTTTCAATGTCGACAGCCTCTAC 110262 || | || || ||||| || ||||| || || Sbjct 3722656 AAGTATTCTTTCTCAATATCAACAGCTTCAAC 3722625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094377745280