Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007-
11-09] 4 sequences; 12,591,251 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq2 82.4 9e-11
>seq2
Length=4539804
Score = 82.4 bits (90), Expect = 9e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875
|| ||||| ||| || ||||||||||| ||||| || || | |||||| ||||||
Sbjct 3722424 GCCTTTGCTGCTGTAGAAGGTATCTTCTTTTCTGGATCGTTTGCCTCTATTTTTTGGCTT 3722483
Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935
||||| || || || ||||| ||||| || ||||| || | || | |||||| |||
Sbjct 3722484 AAGAAACGTGGACTTATGCCTGGTCTTACTTTTTCCAATGAATTGATTTGTCGTGATGAG 3722543
Query 94936 GGACTCCACCAAGAGTTTGC 94955
|| || ||| || |||||
Sbjct 3722544 GGTCTTCACACCGACTTTGC 3722563
Score = 82.4 bits (90), Expect = 9e-11
Identities = 164/239 (69%), Gaps = 3/239 (1%)
Strand=Plus/Minus
Query 9691 TTGCTTTCCCACG-GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAG 9749
||||||| ||| |||||||| ||||| ||||| | || || || || | |||||
Sbjct 4317497 TTGCTTTACCAATTGCATCAATTTCATCTATGAAAATAATACAAGGAGCGTTCTTGCGAG 4317438
Query 9750 CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9809
| |||| ||||| | ||| || | || |||||||||||||| || | ||| |
Sbjct 4317437 CAGTAGCAAAAAGATCTCTTACGCGGGAAGGTCCAACACCAACAAACATTTCAAGAAACT 4317378
Query 9810 TTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9868
| | || ||| | | || ||||| |||| |||||| || ||||| || |||
Sbjct 4317377 CAGAACCTGACACACT-TAAAAAAGGGACGTTAGCTTCACCAGCGGTGGCTTTAGCAAGA 4317319
Query 9869 AGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
||||| ||||| ||||| || ||| | || | |||||| || ||||| || || ||
Sbjct 4317318 AGAGTTTTACCGGTACCAGGAGGACCAGAAAGAATGGCACCACGAGGAATTTTAGCCCC 4317260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260770836960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |