Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 390 2e-103 seq2 210 3e-49 >seq1 Length=5579133 Score = 390 bits (432), Expect = 2e-103 Identities = 1410/2186 (65%), Gaps = 21/2186 (1%) Strand=Plus/Minus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||| ||||||||||| ||||| || |||||| |||| || || || ||||| || Sbjct 4229516 GTACGAAGATAGTACATTCCAGTCTTAAGACCCTTCTTCCAGCCATAAAAGTGCATACTA 4229457 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || | ||| || |||||| | ||||| |||| || |||||| ||| Sbjct 4229456 GTAATTTTTCCGTAGGAAGGATCCTTCAAGTGAATGTTCAAACTTTGGGATTGATCAATG 4229397 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 || | || | || || || | |||| ||||||||| ||| ||||| | ||| Sbjct 4229396 AATGGGCCACGGTCGGCAGCATAGTCAATAACAGTCTTTTGACTAATCTCCCATACGGTT 4229337 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTATT---TTGAATGGAACCACCATCT 77048 ||| ||| | || | || | |||| | | | | ||| ||||| ||| || Sbjct 4229336 TTGTAAAGATCCTTAAGGTCTTGAGGAATTTCAGGAATCGCTTGGATGGATCCATCAAGC 4229277 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108 | || | | ||||| || || ||||||||||| | | ||| | | | | | Sbjct 4229276 ATAACAAGTTTGTTCTTCATGTCCTCATTCCACAAATCACGCTCAACGAGATCCTTCAAC 4229217 Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168 || ||||| || ||||| ||||| ||||| | || | || ||| || ||| Sbjct 4229216 AGCCATGGATTGACAATTTGGAATTCACCAGAAAGAACACGGCGTTGGTACATGTTAGAA 4229157 Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228 |||||||| || | | | |||||| || | ||||||| || |||||||| ||||| Sbjct 4229156 GTATATGGCTCAAAACACTCATTGAAACCAAGGATTTGAGATGTTGAAGCAGTAGGCATT 4229097 Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 77288 ||||| || || ||| ||| | | || ||| | || || || || | | | Sbjct 4229096 GGTGCTACTAACAAAGAATTACGAATTCCGTGTTTAGCAATCTTTTCCTTCAACTCGGCC 4229037 Query 77289 CAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTA 77348 |||||||||||||| | || ||| | ||| | || || |||| ||| || | Sbjct 4229036 CAATCCCAAAGATCGGTGGGATTAACGTTCCACATGTCATACTGTAAAATACCCTGGGAT 4228977 Query 77349 GCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCT 77408 ||| ||||| | ||| | ||||| | || ||| | || | || ||| || Sbjct 4228976 GCAGGAGATCCTTCATAACTCTCATATGTACCCTCTACCTGGGCAATCTCGCAAGAGGCC 4228917 Query 77409 TCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCAAT 77467 || | ||| ||| |||||||||||||| || | | || || | |||| || | Sbjct 4228916 TCAAGGGCTGCGTGGTAAATTGTTTCGAAGATTTGGATGTTTAGCTTCTTG-GCACCTGC 4228858 Query 77468 ACTATCAAACGGATAATGTAAAA-GAATAAAGGCATCTGCTAATCCCTGAACTCCAATAC 77526 | || || || || | | | ||| |||| |||| || | || ||||| || | || Sbjct 4228857 AGATTCGAATGGTAAACGAAGAGCGAAGAAAG-CATCGGCAAGACCTTGAACACCCAAAC 4228799 Query 77527 CAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGT 77586 ||| || | ||| | | ||||| | |||||| |||| ||||||||| |||| || Sbjct 4228798 CAACGGGACGATGGCGCATATTGCTACGGCGAGCTTCAGGAACAGGATAATAGTTAACGT 4228739 Query 77587 CTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT 77646 | ||||| || ||||| || | | ||| || || || || || | || || | |||| Sbjct 4228738 CGATAATCTTGTTGAGGTTACGAGTAACGACCTTCACGACATCGTGAAGCTTTTGGAAAT 4228679 Query 77647 CAAATCTTCCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTA 77706 | |||| ||| ||| ||| || |||||| | || || || |||||||| || | Sbjct 4228678 TGTACTTTCCGTCTTTAATAAATGTGGGCAAAGCAACTGAAGCAAGGTTACAAACAGCAA 4228619 Query 77707 CCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGC 77766 | || | || | |||| | ||||| ||||| || || || ||||| | Sbjct 4228618 CTTCGTCAGGAGAAGAGTATTCAACAATCTCAGTACACAGGTTTGAGCAGCGAATAGTAC 4228559 Query 77767 CCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCC 77826 | | ||| | || ||| ||| |||||||| |||||||| | || || ||| | | Sbjct 4228558 CAACATTCTTCTGATTGGACTTACGGTTGCATGAATCCTTATACAACATGAAAGGATTAC 4228499 Query 77827 CGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTA-TCATAGAT 77885 | ||||||| ||||||| | ||| | | ||| || | ||| || | | || Sbjct 4228498 CAGTTTCAACTTGTGATTGAAGAATGGCGTACCAAACTTTTTGAGCAGGTAATGAACGAC 4228439 Query 77886 TTGTATCGCCTCTCTCTTTCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAA 77943 | || |||| | ||||| || ||| | || |||| || || ||||||| Sbjct 4228438 GACCA-CGGTTCTCCTTCTCATACTTTTCGTAGAGGGCAA--CAAACTCGTCACCCCAAA 4228382 Query 77944 CATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT-A 78002 |||| |||| || || ||||| ||||| | || | ||| | | | | | || | Sbjct 4228381 CATCTGCCAAACCTGGAGCCTCATTGGGGCAGAAGAAGGTCCATTGCTCGT-TACGTTCA 4228323 Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 || |||| |||||| | ||||| ||||| | ||| || | | || ||| || | | Sbjct 4228322 ACACGTTGCATAAACAAGTCAGGAATCCACAAGGCA-TAGA-ACATTTCGCGTGCGCGGA 4228265 Query 78063 --TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATG 78120 || || || || | ||||| ||| || | ||| ||||||| ||| | |||||| | Sbjct 4228264 AATCCTCGTTGCCATGAGTCTTTCGAAGTTCTAAAAAGTCCATAACATCGGCATGCCAAG 4228205 Query 78121 GTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGG 78180 | || | ||| ||| | | ||||| || ||||||||||| || || | ||| | | Sbjct 4228204 GCTCCAAATAGGCTGCAAAGGCACCAGGACGCTTATTACCTCCTTGGTCAACATAACGAG 4228145 Query 78181 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAG 78240 | ||||| || ||||| | | ||| || | ||| ||||| || || ||||| ||||||| Sbjct 4228144 CTGTGTTGTTGTAAACACGAATCATGGGGACAATTCCGTTGGAAGTACCATTAGTTCCAG 4228085 Query 78241 AAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCT 78300 |||||| || |||| | ||| || ||| || || || || || || ||| Sbjct 4228084 CAATATACGAACCGGTTGCTCTAATGTTGTGAATATTAATACCAATACCGCCAGCGGTCT 4228025 Query 78301 TAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA 78360 | || || | ||| || || | ||| |||||||| || || ||| ||| || ||| Sbjct 4228024 TGGAGATCATAGCACACATCTTGAGTGTGTCGTAGATTCCTTCAATAGAGTCGTCTTTCA 4227965 Query 78361 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCG 78420 | ||| || ||||| ||| | ||| || || ||| || ||||| || | || | Sbjct 4227964 TCGTAACGAGGAAACAAGAAGAGAGTTGGGGACGAGGAGTACCGGCATTGAAAAGAGTTG 4227905 Query 78421 GAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTA 78480 | || ||||| ||||| | || ||| | | |||||||||||||||||| | ||| | Sbjct 4227904 GTGAAGCATGGGTAAAGTAGCGTTGAGACATCAAATTGTATGTTTCAATAGCAGCTTCAA 4227845 Query 78481 TGTCC-CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACC 78539 ||||| || | || || || || || |||||||| | |||||||||||| | ||| | Sbjct 4227844 TGTCCTCACCG-TGGATACCAACGGCGACACGCATAATCATATGCTGAGGGCGCTCAGCA 4227786 Query 78540 GTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 78599 || | || ||| || || || || ||||| || || ||||| | ||| Sbjct 4227785 ACTTTGCCGTCGATACGCAATAAATAAGAACGCTCTAAAGTCTTGAAGCCAAAGAAATTG 4227726 Query 78600 TATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACA 78659 || | || || | ||||| || ||| || || || || || |||| ||| | || Sbjct 4227725 TAAGTGAAATCACGATCGTATATGATAGCACTATCTAATTCGTCCTTGTGTTTCATTACG 4227666 Query 78660 ATATCCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAG 78719 ||||| || | || || || || | | | |||| ||||| |||||| Sbjct 4227665 ATATCGTAGATTTTGTCAGAGATCATGGGGGCAGGCTTGTCTGTTTTGGGATTTACATAG 4227606 Query 78720 TTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGAT 78779 | | | | || | ||| ||| | || | |||| ||| || | || || Sbjct 4227605 TCATGAAGCTGTTGAACGACAGTTGAAAACACCTTCTCGGTTTGCTTATGCAAGTTGGAA 4227546 Query 78780 ACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCT 78839 ||||| ||||| ||||| | |||||||||||||||||| | |||||| ||| || || Sbjct 4227545 ACAGCAATTCTAGCAGCCAAAATAGCATAATCAGGATGCTTTGTAGTCATAGTCGCGGCA 4227486 Query 78840 ATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATA 78899 |||| || |||||| |||| || || ||||| || || || ||| | || ||| Sbjct 4227485 GTTTCAGCAGCTAAATTATCCAATTCAATAGTGGTAACACCGGGATACACACCAGAAATG 4227426 Query 78900 ACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTT 78959 ||||| | ||||| ||| ||||| ||| || | | | |||||||| | | Sbjct 4227425 ACTTTTTGAGTGATTTCGACGGGATCAACATGATCGGAATCAAGGCCATAACAAAGCCTC 4227366 Query 78960 CTAATACGAGATGTGATTTTATCAAA 78985 || ||||| |||||||| ||||| Sbjct 4227365 GAAACACGAGCAGTGATTTTGTCAAA 4227340 >seq2 Length=4539804 Score = 210 bits (232), Expect = 3e-49 Identities = 564/859 (66%), Gaps = 10/859 (1%) Strand=Plus/Minus Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930 || || || ||||| ||||| ||| | || || ||||| ||||| ||||| || ||||| Sbjct 3722836 TTTTCAAAGAAATTTGTTTTTCCTGCTAAAGAGATATTCTCCATGAAATCGAAAGGATTG 3722777 Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 47990 | | ||||| || | | || || | | || | ||| ||||| ||||| Sbjct 3722776 GTTACGTTATAGTACTTGTCATTGCCCAAAGCAACCAACAAACGATCAGCAACAAATTCA 3722717 Query 47991 ATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTA 48050 ||||| ||||| || |||||| || | || |||| || ||||| ||||| Sbjct 3722716 ATATACTGACACATCAAATCCTTATTCATACCAAGCAGACTAACGGGAAGAGCGTCCGTG 3722657 Query 48051 AGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTAC--CGTTTCCTCAC 48108 | | |||| || ||| ||||| || || || || | | || | || | | Sbjct 3722656 AAGTATTCTTTCTCAATATCAACAGCTTCAACAATAATGGCTTCAACAACCTTGCGGCC- 3722598 Query 48109 TTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCAT 48168 |||| | | |||||| ||||||| ||||| ||||| || |||||||| |||| Sbjct 3722597 -TGGTCTGTGCTTCAAATGACTAAACATCAAACAGGCAAAGTCGGTGTGAAGACCCTCAT 3722539 Query 48169 CTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCC 48228 | | || ||| ||||| || ||||| || ||||| ||||| ||||||||||| || |||| Sbjct 3722538 CACGACAAATCAATTCATTGGAAAAAGTAAGACCAGGCATAAGTCCACGTTTCTTAAGCC 3722479 Query 48229 AAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAA 48288 |||| || | || || |||||||||||||| || |||||||| || ||||| || | Sbjct 3722478 AAAAAATAGAGGCAAACGATCCAGAAAAGAAGATACCTTCTACAGCAGCAAAGGCAACCA 3722419 Query 48289 GTCTCTCTCCGTAACTGG---CTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCT 48345 | | | || ||| |||| | | ||||| || | ||||| | || || Sbjct 3722418 AACGAATTGCATAGGTGGAATCTTCATCATTAATCCAACGAAGAGCCCACTTGGCTTTGG 3722359 Query 48346 TCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTT 48405 ||| | | || ||||||| ||||||| || || | |||||| || || Sbjct 3722358 CCTTAATAGAACCCATTGTTAAAATAGCATCGAAATGACGCTGTTTTTCCTTAGGTTCAC 3722299 Query 48406 TAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCT 48465 || ||| ||||| | ||||| || | || ||||||||||||||||| || | Sbjct 3722298 GAATGTATGTATCAAGCAAAAGTGAGTAGGTCTCAGAGTGAATATTTTCAATCATAATTT 3722239 Query 48466 GAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCA 48525 | || || |||| ||| | ||||| | |||||| || || | | || || || | Sbjct 3722238 GGAAACCATAAACACAACGAGCTTCAGGGATCTGAACTTCAGAGCTGAAACGCTCGAGAA 3722179 Query 48526 AATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAAT 48585 ||||||||| || || ||||| ||||| ||| | || | |||| |||||| | Sbjct 3722178 GATTCTCATTAACAATACCATCTGACGCAGCGAAATAGGCGAGTACAGTGGAAATAAAGT 3722119 Query 48586 ATTTTTCGTTGGAAGT---CAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 48642 | ||| | | | | | |||| ||| ||| | ||||| || | ||| | || Sbjct 3722118 AACGTTCATCAGCATTTAACTTGTTATCCCAATCAACCAAGTCTTTCGAAAGATCAATTT 3722059 Query 48643 CTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATT 48702 | ||||| |||||||| ||||| || || || || || | | ||| || || || | Sbjct 3722058 CCTCAGCAGTCCAAAAAGATGCTTCAGCCTTCTTGTAGAATTGCCAAATTTCGTGATACT 3721999 Query 48703 GGATTGGGAAAATAACAAA 48721 ||||| || | |||||| Sbjct 3721998 TAATTGGAAACAAAACAAA 3721980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668765266560