Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 401 9e-107 seq2 241 2e-58 >seq1 Length=5579133 Score = 401 bits (444), Expect = 9e-107 Identities = 1428/2208 (65%), Gaps = 23/2208 (1%) Strand=Plus/Minus Query 75407 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 75466 ||||| ||||||||||| ||||| || |||||| |||| || || || ||||| || Sbjct 4229516 GTACGAAGATAGTACATTCCAGTCTTAAGACCCTTCTTCCAGCCATAAAAGTGCATACTA 4229457 Query 75467 GTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 75526 || | ||| || ||||| | ||||| |||| || |||||| ||| Sbjct 4229456 GTAATTTTTCCGTAGGAAGGATCCTTCAAGTGAATGTTCAAACTTTGGGATTGATCAATG 4229397 Query 75527 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 75586 || | || | || || || | |||| ||||||||| ||| ||||| | ||| Sbjct 4229396 AATGGGCCACGGTCGGCAGCATAGTCAATAACAGTCTTTTGACTAATCTCCCATACGGTT 4229337 Query 75587 TTGAAAACTTGTTTGATATCATCTGGAAGATTTGTATT---TTGAATGGATCCGCCAT-C 75642 ||| ||| | || | || | |||| | | | | ||| |||||||| || | Sbjct 4229336 TTGTAAAGATCCTTAAGGTCTTGAGGAATTTCAGGAATCGCTTGGATGGATCCATCAAGC 4229277 Query 75643 AGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAG 75702 | | | || | | ||||| || || ||||||||||| | | ||| | | | | | Sbjct 4229276 ATA-ACAAGTTTGTTCTTCATGTCCTCATTCCACAAATCACGCTCAACGAGATCCTTCAA 4229218 Query 75703 GAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACT 75762 || ||||| |||||||| ||||| ||||| | || | || ||| || ||| Sbjct 4229217 CAGCCATGGATTGACAATTTGGAATTCACCAGAAAGAACACGGCGTTGGTACATGTTAGA 4229158 Query 75763 GGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCAT 75822 |||||||| || | | | |||||| || | ||||||| ||||||||||| ||||| Sbjct 4229157 AGTATATGGCTCAAAACACTCATTGAAACCAAGGATTTGAGATGTTGAAGCAGTAGGCAT 4229098 Query 75823 AGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTT 75882 ||||| || || ||| ||| | | || ||| | || || || || | | Sbjct 4229097 TGGTGCTACTAACAAAGAATTACGAATTCCGTGTTTAGCAATCTTTTCCTTCAACTCGGC 4229038 Query 75883 CCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCT 75942 ||||||||||||||| | || ||| | ||| | || || |||| ||| || | | Sbjct 4229037 CCAATCCCAAAGATCGGTGGGATTAACGTTCCACATGTCATACTGTAAAATACCCTGGGA 4228978 Query 75943 AGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGC 76002 ||| ||||| | ||| | || || || || || | || | |||||| || Sbjct 4228977 TGCAGGAGATCCTTCATAACTCTCATATGTACCCTCTACCTGGGCAATCTCGCAAGAGGC 4228918 Query 76003 CTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGAT-CTTG-CGCTTCA 76060 ||| | || ||| |||||||||||||| || | | || || | |||| | | | Sbjct 4228917 CTCAAGGGCTGCGTGGTAAATTGTTTCGAAGATTTGGATGTTTAGCTTCTTGGCACCTGC 4228858 Query 76061 AGACTATCAAAAGGATAATGTAAAA-GAATAAATGCATCTGCTAGTCCCTGAACTCCAAT 76119 ||| | | || || || | | | ||| ||| ||||| || || || ||||| || | Sbjct 4228857 AGATT--CGAATGGTAAACGAAGAGCGAAGAAA-GCATCGGCAAGACCTTGAACACCCAA 4228801 Query 76120 ACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAAT 76179 ||||| || | ||| | | ||||| | |||||| |||| ||| ||||| |||| Sbjct 4228800 ACCAACGGGACGATGGCGCATATTGCTACGGCGAGCTTCAGGAACAGGATAATAGTTAAC 4228741 Query 76180 ATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAA 76239 || ||||| || ||||| || | ||| || || || || || | || || | || Sbjct 4228740 GTCGATAATCTTGTTGAGGTTACGAGTAACGACCTTCACGACATCGTGAAGCTTTTGGAA 4228681 Query 76240 ATCAAATTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGC 76299 || | ||||| ||| | | ||| | | ||| | || || || |||||||| || Sbjct 4228680 ATTGTACTTTCCGTCTTTAATAAATGTGGGCAAAGCAACTGAAGCAAGGTTACAAACAGC 4228621 Query 76300 TACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGT 76359 || || | || | | |||| | ||||| || || || || || ||||| Sbjct 4228620 AACTTCGTCAGGAGAAGAGTATTCAACAATCTCAGTACACAGGTTTGAGCAGCGAATAGT 4228561 Query 76360 TCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGT 76419 |||| ||| | || ||| ||| ||| ||||| |||||||| | | || ||| | Sbjct 4228560 ACCAACATTCTTCTGATTGGACTTACGGTTGCATGAATCCTTATACAACATGAAAGGATT 4228501 Query 76420 TCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATA-G 76478 |||||||||| ||||||| | ||| | | ||| || | ||| || | | | Sbjct 4228500 ACCAGTTTCAACTTGTGATTGAAGAATGGCGTACCAAACTTTTTGAGCAGGTAATGAACG 4228441 Query 76479 ATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAA 76538 | | || ||||| | ||||| | | || | |||| || || ||||||| Sbjct 4228440 ACGACCA-CGGTTCTCCTTCTCATACTTTTCGTAGAGGGCAACAAACTCGTCACCCCAAA 4228382 Query 76539 CATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT-A 76597 |||| ||||||| ||| ||||| || || | || | ||| | | | | | || | Sbjct 4228381 CATCTGCCAAACCTGGAGCCTCATTGGGGCAGAAGAAGGTCCATTGCTCGT-TACGTTCA 4228323 Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657 || |||| |||||| | ||||| ||||| | ||| || | | || ||| || | | Sbjct 4228322 ACACGTTGCATAAACAAGTCAGGAATCCACAAGGCA-TAGA-ACATTTCGCGTGCGCGGA 4228265 Query 76658 --TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATG 76715 || || || || | ||||| ||| |||| || ||||||| ||| | |||||| | Sbjct 4228264 AATCCTCGTTGCCATGAGTCTTTCGAAGTTCTAAAAAGTCCATAACATCGGCATGCCAAG 4228205 Query 76716 GTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGG 76775 | || | ||| || | |||| || || ||||||||||| || || | ||| | | Sbjct 4228204 GCTCCAAATAGGCTGCAAAGGCACCAGGACGCTTATTACCTCCTTGGTCAACATAACGAG 4228145 Query 76776 CAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAG 76835 | ||||| || ||||| | | ||| || | ||| ||||| || |||||||| ||||||| Sbjct 4228144 CTGTGTTGTTGTAAACACGAATCATGGGGACAATTCCGTTGGAAGTACCATTAGTTCCAG 4228085 Query 76836 AAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTT 76895 |||||| || ||| | ||| || |||| | || || || || || | | Sbjct 4228084 CAATATACGAACCGGTTGCTCTAATGTTGTGAATATTAATACCAATACCGCCAGCGGTCT 4228025 Query 76896 TAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCA 76955 | ||||| | |||||| || | |||||| ||||| || || ||| || || ||| Sbjct 4228024 TGGAGATCATAGCACACATCTTGAGTGTGTCGTAGATTCCTTCAATAGAGTCGTCTTTCA 4227965 Query 76956 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAG 77015 | ||| || ||||| ||| | ||| || || ||| || ||||| || | || | Sbjct 4227964 TCGTAACGAGGAAACAAGAAGAGAGTTGGGGACGAGGAGTACCGGCATTGAAAAGAGTTG 4227905 Query 77016 GAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTA 77075 | || ||||| || || | || ||| | | |||||||||||||||| | ||||| | Sbjct 4227904 GTGAAGCATGGGTAAAGTAGCGTTGAGACATCAAATTGTATGTTTCAATAGCAGCTTCAA 4227845 Query 77076 TATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACA 77134 | ||| || | || || || || ||||||||||| | |||||||||||| || || || Sbjct 4227844 TGTCCTCACCG-TGGATACCAACGGCGACACGCATAATCATATGCTGAGGGCGCTCAGCA 4227786 Query 77135 GTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 77194 || | || ||| || || || || ||||| || || ||||| | ||| Sbjct 4227785 ACTTTGCCGTCGATACGCAATAAATAAGAACGCTCTAAAGTCTTGAAGCCAAAGAAATTG 4227726 Query 77195 TATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACA 77254 || | || || | ||||| || ||| | || || || |||||| | ||| | || Sbjct 4227725 TAAGTGAAATCACGATCGTATATGATAGCACTATCTAATTCGTCCTTGTGTTTCATTACG 4227666 Query 77255 ATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAG 77314 ||||| || || ||| || || || | | | | |||| ||||| |||||| Sbjct 4227665 ATATCGTAGATTTTGTCAGAGATCATGGGGGCAGGCTTGTCTGTTTTGGGATTTACATAG 4227606 Query 77315 TTAAATAAGTCTTCCATTAC-GTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGA 77373 | | | | || | || || | ||| | || | |||| ||| || | || || Sbjct 4227605 TCATGAAGCTGTTGAACGACAGTTG-AAAACACCTTCTCGGTTTGCTTATGCAAGTTGGA 4227547 Query 77374 TACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGC 77433 || || ||||||||||| | ||| ||||| |||||||| | |||||| || || || Sbjct 4227546 AACAGCAATTCTAGCAGCCAAAATAGCATAATCAGGATGCTTTGTAGTCATAGTCGCGGC 4227487 Query 77434 TATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAAT 77493 |||| || |||||| |||| ||||| ||||| ||||| ||| ||| | || ||| Sbjct 4227486 AGTTTCAGCAGCTAAATTATCCAATTCAATAGTGGTAACACCGGGATACACACCAGAAAT 4227427 Query 77494 AACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTT 77553 ||||| | |||| || ||||| ||| |||| | | |||||||| | | Sbjct 4227426 GACTTTTTGAGTGATTTCGACGGGATCAACATGATCGGAATCAAGGCCATAACAAAGCCT 4227367 Query 77554 TCTAATACGAGATGTGATTTTATCAAACATGACATTCTCCTTACATCC 77601 || ||||| |||||||| ||||| || ||||| | || ||| Sbjct 4227366 CGAAACACGAGCAGTGATTTTGTCAAAGGCCACTTTCTCTTGACGTCC 4227319 >seq2 Length=4539804 Score = 241 bits (266), Expect = 2e-58 Identities = 592/894 (66%), Gaps = 8/894 (1%) Strand=Plus/Minus Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCT 46383 |||||||| || ||||||| ||| || || || || ||||| ||||| ||| Sbjct 3722872 GACATAACGCCAGCAATTTGGTAGTCAGAAACTTTCTTTTCAAAGAAATTTGTTTTTCCT 3722813 Query 46384 TCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAAT 46443 | || || ||||| ||||| ||||| || ||||| || || ||||| || | | Sbjct 3722812 GCTAAAGAGATATTCTCCATGAAATCGAAAGGATTGGTTACGTTATAGTACTTGTCATTG 3722753 Query 46444 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAA 46503 || || | | || | ||| ||||| ||||| |||||| ||||| || | Sbjct 3722752 CCCAAAGCAACCAACAAACGATCAGCAACAAATTCAATATACTGACACATCAAATCCTTA 3722693 Query 46504 TTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACA 46563 ||||| || | || | || || ||||| ||||| | | |||| |||||| ||| Sbjct 3722692 TTCATACCAAGCAGACTAACGGGAAGAGCGTCCGTGAAGTATTCTTTCTCAATATCAACA 3722633 Query 46564 GCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAAC 46623 || || || || | | || | | |||| ||| ||||||| ||||| Sbjct 3722632 GCTTCAACAATAATGGCTTCAACAACCTTGCGGCCTGGTCTGTGCTTCAAATGACTAAAC 3722573 Query 46624 ATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAAT 46683 || ||||| ||||| || ||||| || ||||| | || ||| ||||| || ||||| Sbjct 3722572 ATCAAACAGGCAAAGTCGGTGTGAAGACCCTCATCACGACAAATCAATTCATTGGAAAAA 3722513 Query 46684 GTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAA 46743 || || |||||||| |||||||| || || |||||||| |||| || || ||||||||| Sbjct 3722512 GTAAGACCAGGCATAAGTCCACGTTTCTTAAGCCAAAAAATAGAGGCAAACGATCCAGAA 3722453 Query 46744 AAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGG---CATCA 46800 ||||| || ||||||||||| || || || || | | | | || ||| | ||| Sbjct 3722452 AAGAAGATACCTTCTACAGCAGCAAAGGCAACCAAACGAATTGCATAGGTGGAATCTTCA 3722393 Query 46801 TTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATA 46860 | || |||||| | ||||||| | || || ||| | | || ||||||| ||| Sbjct 3722392 TCATTAATCCAACGAAGAGCCCACTTGGCTTTGGCCTTAATAGAACCCATTGTTAAAATA 3722333 Query 46861 GCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTA 46920 |||| || || | |||||| | | || || |||||||| | ||||| Sbjct 3722332 GCATCGAAATGACGCTGTTTTTCCTTAGGTTCACGAATGTATGTATCAAGCAAAAGTGAG 3722273 Query 46921 TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 46980 || | || || ||||| |||||||| || || || || |||| ||| | |||||| Sbjct 3722272 TAGGTCTCAGAGTGAATATTTTCAATCATAATTTGGAAACCATAAACACAACGAGCTTCA 3722213 Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTC-AGACAAATTCTCATTCACTATTCCATCACT 47039 | ||||| || || | | || || || ||| | ||||||||| || || ||||| Sbjct 3722212 GGGATCTGAACTTCAGAGCTGAAACGCTCGAGA-AGATTCTCATTAACAATACCATCTGA 3722154 Query 47040 AGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGT---CAGTTT 47096 ||||| ||| | || | |||| |||||| || |||||| | | | | || Sbjct 3722153 CGCAGCGAAATAGGCGAGTACAGTGGAAATAAAGTAACGTTCATCAGCATTTAACTTGTT 3722094 Query 47097 ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTC 47156 || ||| ||| | ||||| || | ||| | ||| ||||| ||||| || || || || Sbjct 3722093 ATCCCAATCAACCAAGTCTTTCGAAAGATCAATTTCCTCAGCAGTCCAAAAAGATGCTTC 3722034 Query 47157 TGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 || || || || | | ||| || || |||| | || ||||| | |||||| Sbjct 3722033 AGCCTTCTTGTAGAATTGCCAAATTTCGTGATACTTAATTGGAAACAAAACAAA 3721980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934364353280