Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq9 120 6e-22 >seq9 Length=1448665 Score = 120 bits (132), Expect = 6e-22 Identities = 312/468 (67%), Gaps = 6/468 (1%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 ||||| | |||||||| || | | |||||| ||||| | || || || |||| Sbjct 448570 TTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGATCTTTC 448629 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 ||||||| ||||| ||| ||| | ||| |||| ||| | || ||||| Sbjct 448630 GCATCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCAACGAA 448689 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTAT-TCAAAGCT 230351 ||||| || ||||| |||||||| || | || || || | | | || | || Sbjct 448690 CTCATCTCCCGTGACGAAGGTCTCCA-CACCGATTTCGCATGCCTCCTTTTCTCTCATCT 448748 Query 230352 CCAGAACAAGCTA-CCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACG 230410 | || || | | ||| | || || || || | ||||||| ||||| ||||||| || Sbjct 448749 CAAGCACCGCCCATCCAAACAAGCCG-TCCAAGATGTCATTACCGAAGCCGTTGAAATCG 448807 Query 230411 AAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGG-CATGAACGCTGAACTT 230469 || | || ||| | || ||| |||| || |||| | |||| ||||||| || || Sbjct 448808 AACAAGAATTCTTGACCGAGGCTCTTCCTTG-CGCCCTCTTGGGCATGAACTCTACTCTC 448866 Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| || ||||| || ||||| || || || | | ||||| | ||| |||| ||| Sbjct 448867 ATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTCCTCGTTGCTTTGGGTAACGACAAA 448926 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 || ||||| ||| ||||| || | || |||||| |||||| | || |||||| Sbjct 448927 GTCTACAAGTCTGCCAACCCATTCGACTTCATGGAGAACATTTCCTTGGCTGGCAAGACC 448986 Query 230590 AACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||| ||||||||| | || | || || || | | | ||||| ||| Sbjct 448987 AACTTTTTCGAAAAGAGAGTTGGAGATTACCAAAAGGCCGGTGTCATG 449034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819717135080