Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4 102 9e-17 >seq4 Length=2737121 Score = 102 bits (112), Expect = 9e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| ||||| || || | ||| ||||||||| || ||||| || | || || || | Sbjct 1682905 ACGTAACACTAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCC 1682964 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || ||||| || ||||| || | |||||| ||||||| || | | |||||| Sbjct 1682965 ATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTT 1683024 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || ||||| | | | ||||| || || || |||| ||||| Sbjct 1683025 GTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 1683084 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||||| || ||||| || ||||| ||||| Sbjct 1683085 AGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1683120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815341320480