Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 6e-14 >seq1 Length=2965994 Score = 93.3 bits (102), Expect = 6e-14 Identities = 154/228 (68%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | ||| | | ||||| || || || ||| ||| || || || ||||| | Sbjct 1569645 CCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGA-ATGTTGTAATCCAA 1569703 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||||||||||| ||| || || || ||||| || || ||||||| ||| ||||| || || Sbjct 1569704 AAGAGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAATCGTTGTTGATCAGGTGG 1569763 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 ||| || || |||||||| |||||||||| |||||| Sbjct 1569764 AATACCCTCCTTATCTTGAATCTTGGCCTTAACATTATCAATAGTATCTGAAGATTCTAC 1569823 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| |||||| || || || || || || || | || |||||||| Sbjct 1569824 CTCTAATGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1569871 Score = 89.7 bits (98), Expect = 8e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||||||||||||| |||||||| || || || || |||||||| | || ||| || Sbjct 1569891 ACCAAATGTAAAGTCGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCA 1569950 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | ||| || |||||||| || | | ||| ||||| || ||||| || ||||| ||||| Sbjct 1569951 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGGGGAATGCCCTCTTTGTCTTG 1570009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743523463070720