Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 5e-11 >seq4 Length=2737121 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || || || |||||||||||||| || ||| | || || | ||||| || ||||| Sbjct 1682930 TCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAG 1682989 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || | ||||| |||||| || | | ||||||||| ||| || ||||| | || Sbjct 1682990 ATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGGATC-TTGGCTTTGACATT 1683048 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | || || || || | ||||| |||||||| ||||| || || || Sbjct 1683049 GTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGTTTTGCCCGTGAGGGTCTTGAC 1683108 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 1683109 GAAGATCTGCAT 1683120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070755768960