Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq9 141 8e-29 seq1 84.2 2e-11 >seq9 Length=1448665 Score = 141 bits (156), Expect = 8e-29 Identities = 233/333 (70%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| |||||||| || || || ||||||| ||||| | || || Sbjct 448121 ATCTGGCAGATGTACAAGAAGGCAGAGGCCTCTTTCTGGACCGCAGAAGAGATTGATTTG 448180 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||||||| || ||||| || ||| | | || || Sbjct 448181 TCAAAGGATCTTCACGATTGGAATAATAGACTCAATGACGACGAGCGTTACTTCATCTCC 448240 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||| ||||||||||| ||||| |||||||| |||||||| ||| Sbjct 448241 CACGTTCTCGCATTCTTCGCAGCATCCGATGGAATTGTAAACGAGAACTTGGTCGAGAGA 448300 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || ||||| ||| | | || || ||||||| ||||| || ||| | || Sbjct 448301 TTCAGCGGTGAAGTTCAAATTCCAGAAGCACGATGCTTCTACGGTTTCCAAATCATGATG 448360 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-CAACGA 57865 |||||| | || || |||| || || || |||||||| || ||| | ||||| ||| | Sbjct 448361 GAAAACATCCACTCCGAAACATACTCTCTTCTCATCGACACATACATCAAGGAGCAAGCA 448420 Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAAC 57898 | | | || || || |||||||| || || || Sbjct 448421 CAAAAGACATA-CCTTTTCAACGCTATTGACAC 448452 >seq1 Length=2965994 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || || || |||||||| | || ||||| | || Sbjct 1570099 ATGCAAATCTTCGTTAAGACTCTCACCGGAAAGACGATCACTTTAGAGGTTGAGTCATCG 1570040 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||| || ||| | || || || || Sbjct 1570039 GACACCATCGACAACGTGAAGGCTAAGATTCAAGACAAAGAGGGCATTCCCCCTGATCAA 1569980 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || ||||| || || | || || ||| | ||| || ||| Sbjct 1569979 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGCCGCACTCTTTCCGACTACAAC 1569920 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||||||||||||| | ||| |||| ||| | || | || |||| Sbjct 1569919 ATCCAAAAAGAATCGACTTTACATTTGGTTCTTCGTCTCCGTGGTGGTA 1569871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764639222720