Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq9 123 4e-23 >seq9 Length=1448665 Score = 123 bits (136), Expect = 4e-23 Identities = 204/289 (71%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||||| || ||||| | |||||| | ||| || Sbjct 448121 ATCTGGCAGATGTACAAGAAGGCAGAGGCCTCTTTCTGGACCGCAGAAGAGATTGATTTG 448180 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||||||| | | | | | | ||| ||||| | || || || Sbjct 448181 TCAAAGGATCTTCACGATTGGAATAATAGACTCAATGACGACGAGCGTTACTTCATCTCC 448240 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAA-TCTGTTGACACG 125197 ||| || | || ||||| || | ||||||||||| || ||||| || | || || | | Sbjct 448241 CACGTTCTCGCATTCTTCGCAGCATCCGATGGAATTGTAAACGAGAACTTGGTCGAGA-G 448299 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 |||| | |||| | |||||||| | ||||| ||||| ||||||||||||| Sbjct 448300 ATTCAGCGGTGAAGTTCA-AATTCCAGAAGCACGATGCTTCTACGGTTTCCAAATCATGA 448358 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 | || ||| | ||||| |||| |||||| || || |||| ||||| Sbjct 448359 TGGAAAACATCCACTCCGAAACATACTCTCTTCTCATCGACACATACAT 448407 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || ||||||||||| || ||||| |||||||| || || ||| || ||||||| Sbjct 448582 CTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGATCTTTCGCATCCATCTTC 448641 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 |||||||||||||| || |||||| | ||||| || | ||||| | || || || Sbjct 448642 TGGCTCAAGAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCAACGAACTCATCTCCCGT 448701 Query 125547 GACGAGGGCCTACAC 125561 ||||| || || ||| Sbjct 448702 GACGAAGGTCTCCAC 448716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056272816160