Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 123 6e-23 >seq1 Length=2965994 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | |||||| || |||||||| || || || ||||| || ||||| | || || Sbjct 1569887 AAGAACCAAATGTAAAGTCGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATC 1569946 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || ||||| || |||||||| || || | ||||||||||| || || || ||||| || Sbjct 1569947 CTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGGGGAATGCCCTCTTTGTC 1570006 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||| || || || || || | ||| || | || ||||||| || || || Sbjct 1570007 TTGAATCTTAGCCTTCACGTTGTCGATGGTGTCCGATGACTCAACCTCTAAAGTGATCGT 1570066 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || || || || || || ||||| Sbjct 1570067 CTTTCCGGTGAGAGTCTTAACGAAGATTTGCAT 1570099 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 ||| || ||||| || || || | |||||||| || || || | || ||||| || || Sbjct 1569680 TTCCTTTTGAATGTTGTAATCCAAAAGAGTTCTGCCATCCTCCAACTGCTTTCCGGCGAA 1569739 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 || | | ||||||||||| || || || || ||||| |||||||| || || ||||| Sbjct 1569740 GATCAATCGTTGTTGATCAGGTGGAATACCCTCCTTATCTTGAATCTTGGCCTTAACATT 1569799 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | ||||| || ||||||||||| ||| || ||||| ||||| | || || || Sbjct 1569800 ATCAATAGTATCTGAAGATTCTACCTCTAATGTGATGGTCTTTCCAGTCAAGGTCTTGAC 1569859 Query 104548 AAATATCTGCAT 104559 ||| || ||||| Sbjct 1569860 AAAGATTTGCAT 1569871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151393738275728