Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 seq4 93.3 4e-14 >seq1 Length=2965994 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || ||||||||| | ||| ||||| | ||| || |||||| Sbjct 1569662 CACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAATCCAAAAGAGTTCTGCCATCCTC 1569721 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || ||| |||||| | ||||| |||| ||| ||||| || |||||||| || || || | Sbjct 1569722 CAACTGCTTTCCGGCGAAGATCAATCGTTGTTGATCAGGTGGAATACCCTCCTTATCTTG 1569781 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||| || | | ||| || | || || || | |||||||| || Sbjct 1569782 AATCTTGGCCTTAACATTATCAATAGTATCTGAAGATTCTACCTCTAATGTGATGGTCTT 1569841 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||| | || || |||||||| ||||| Sbjct 1569842 TCCAGTCAAGGTCTTGACAAAGATTTGCAT 1569871 >seq4 Length=2737121 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 || ||||| ||||| | ||| || |||||||| | ||| || ||| | ||| | | Sbjct 1682906 CGTAACACTAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCA 1682965 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| || || |||||| | ||||| |||| || || || || || || || || ||| Sbjct 1682966 TCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTG 1683025 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || || ||||| | ||| ||||| | || || || | ||||| Sbjct 1683026 TCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATA 1683085 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||||| || || || || || || |||||||||||| Sbjct 1683086 GTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 1683121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289429249760