Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq41 113 7e-21 seq37 104 4e-18 >seq41 Length=496475 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||||| |||| | | |||| ||||||||||| ||||||||||||||||| Sbjct 427570 GCTAAGCGTCATCGTAAGAT-TTTGAGAGACAACATCCAAGGTATCACCAAGCCAGCTAT 427628 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | | ||||| |||||||||||||| ||||||||| | |||| Sbjct 427629 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 427669 Score = 107 bits (118), Expect = 3e-19 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 16541 TATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 || ||||||| |||| ||||||||||| |||||| || || || | |||||| || Sbjct 427778 TACGAAGAGACCCGTGGTGTTTTGAAGACCTTCCTTGAGGGTGTCATTCGTGATGCCGTC 427837 Query 16601 CACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTG 16660 ||||||||| ||||| || || ||||||||||| ||| | ||| | || || || ||| Sbjct 427838 ACCTATACCGAACACGCCAAGCGCAAGACTGTCACTTCCCTCGATGTTGTTTACGCTTTG 427897 Query 16661 AAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | ||||| |||| | |||||||| || ||||| Sbjct 427898 AAGAGACAAGGTCGTACCCTCTATGGTTTCGGTGGTTAA 427936 >seq37 Length=558888 Score = 104 bits (114), Expect = 4e-18 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||| |||| | | |||| ||||||||||| || || ||||| ||||| Sbjct 86125 GCTAAGCGTCATCGCAAGAT-TTTGAGAGACAACATCCAAGGCATAACTAAGCCCGCTAT 86183 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 | | ||||| |||||||||||||| ||||||||| |||| Sbjct 86184 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 86222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074911078988