Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq36 280 2e-70 seq9 147 3e-30 >seq36 Length=569963 Score = 280 bits (310), Expect = 2e-70 Identities = 1322/2073 (64%), Gaps = 65/2073 (3%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 || |||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 132103 GTAAATTGAATTGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 132044 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || | ||||||| |||||||||| || | ||| | ||||| || Sbjct 132043 CCCAATTTCCATCCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 131984 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || || ||||| |||||| ||||||||| || || || | || |||||||||| | Sbjct 131983 TGAATGTTCATTGATTGAGATTGATCGATAAATGCACCACGATCAGCAGCCATTTGAACA 131924 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || || ||| | ||||||||||| ||| || |||| || || || |||||| | Sbjct 131923 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCTTTGATGTCAGCTGGAATG 131864 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 || | | || ||||| ||||||||||| || || || | ||||| || | ||| | Sbjct 131863 TTGGGGATGTTTTGAATCGATCCACCATCGGCAATGATACGGTTCTTCATGTTGTCAGAC 131804 Query 62292 CATA-----ATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62346 || | || | | | ||| || | ||||| || ||||| ||||| |||| Sbjct 131803 CAGAGACCCATATCCACAAGGT-----CTTTGAGGAGCCATGGGTTAACAACTTGGAATT 131749 Query 62347 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62406 |||||| | || | || | ||| || || ||||| ||||| | | || || Sbjct 131748 CTCCAGCTAGAACACGACGTGAGTAGATGTTTGAAGTATATGGTTCGAAACATTCGTTGA 131689 Query 62407 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62466 || | ||||| | ||| ||||| ||||||||||| || | | || | || Sbjct 131688 AACCGAGGATTTGTGAAGTACTAGCAGTAGGCATAGGTGCAACGAGAAGGGAGTTGCGAA 131629 Query 62467 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62526 |||| | |||| | || | || ||||||| ||| | ||| || || | Sbjct 131628 TTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGAAGGGGTGA 131569 Query 62527 CNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTA 62582 | ||| || ||| || ||||| | | ||| ||| || Sbjct 131568 CGCCCCACATGTCATATTGGAGTTCACCCTTGGAGACTGGGG----AGCCTTGATAGGTT 131513 Query 62583 TCGTATGGTCC---TTCCTTCTCAG-CTAGTTCACAACTCGCCTCTAATGCACCGTAATA 62638 ||||| || || |||||| || || | ||| | || || ||| ||| || Sbjct 131512 TCGTACGGGCCAAGTTCCTTTGCAATCTCG---ACAGATGAGGTC-AAGGCAGCGTGGTA 131457 Query 62639 AATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAAT 62697 |||||| ||||| |||| | || || | |||| ||||| | |||||||||| | Sbjct 131456 AATGGTCTCGAAAATCTGGATGTTGAGGTGCTTG-GCTTCTGGCGAATCAAATGGAAGAC 131398 Query 62698 TTAAGAG--AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 62755 ||||| || ||| || || || | ||||||||||||| | ||||||||| || | Sbjct 131397 G-AAGAGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGACG 131340 Query 62756 CTTATTAGAGATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 62814 ||| | |||| | ||||| | | |||||||| || ||||| || || || || | Sbjct 131339 GAAATT-GCTCTTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCA 131281 Query 62815 GATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCAT 62871 ||||| || | |||| ||| || || | || || | |||||| | || | ||| Sbjct 131280 AGTTTCTAACGACAACTTGGACGACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCAT 131221 Query 62872 CTATT---AC-AAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62927 || || ||| || | || ||| || |||| ||||| || ||||||| Sbjct 131220 TCATGTTGACGAAAGTTGGTAGAG-CAATTGAAGCCAAGTTACAGCAAGCAACCTCATCT 131162 Query 62928 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTT 62987 | | | || | | ||||| ||||| | || | ||||| || | || Sbjct 131161 GGTGCAGAGTACTCAACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTC 131102 Query 62988 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 63047 | ||| || ||||| ||||| || ||||| || ||||| ||||| ||| | || || || Sbjct 131101 TTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTCTCG 131042 Query 63048 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC 63107 | |||| || | ||| | | ||| | | ||||||| || || ||| | | Sbjct 131041 GTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGACCC 130985 Query 63108 CTTTCTC---TTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63162 || || |||| || | ||| | | | |||||||| || || |||||| Sbjct 130984 TTTCCTGCCTTTTCATAACTCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTG 130927 Query 63163 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63222 |||| ||||| ||||||| || ||||| | | ||| ||||| | | | || || | Sbjct 130926 CCAAACCAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCAACACGCT 130867 Query 63223 TCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCG 63281 |||| || | |||||||||||| | || ||| || ||||| | | | | ||| || Sbjct 130866 TCATGAACAAATCAGGAATCCACA-AGGCATAGAAGAGATCGCGCGCACGAACTTCTTCC 130808 Query 63282 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63341 || || || || ||||| || ||| | | || ||| | |||||| || || | | Sbjct 130807 TTACCGTGGTTTTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGG 130748 Query 63342 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63401 || | || | | ||||| |||||||| || || ||||| | ||||| || ||||| Sbjct 130747 TAAACAGCAAACGCACCAGGACGTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTG 130688 Query 63402 TTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAG 63461 || |||||| | ||| |||| |||||| || || | || |||||||||| ||| || Sbjct 130687 TTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCGTTGGTACCGGCGATGTAT 130628 Query 63462 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63521 ||| | ||||| || | ||| ||||| || || || || | || ||||| Sbjct 130627 GCACCAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATC 130568 Query 63522 AATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGT 63581 | || || || || || || |||||||| || || || || || |||||| | Sbjct 130567 ATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATGTCGATG 130508 Query 63582 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63641 || || || || | ||| | ||| |||||| ||| | || || ||||| Sbjct 130507 AGGAAGCAAGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGTGTTGGGGAAGCA 130448 Query 63642 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCA 63700 || ||||| | || | || | | ||||| || || ||||| || ||||| || Sbjct 130447 TGTGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCA 130388 Query 63701 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63760 | ||||| || || || |||||||| | ||| || ||||| | ||| | | ||| Sbjct 130387 CCG-TGAATACCAACGGCAACACGCATGATCATTTGTTGAGGACGTTCCGCAACTTTGCC 130329 Query 63761 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 63818 | | || | || ||| || | || ||||| || || || | ||| |||| Sbjct 130328 ATCAAGACGTAAAAGATATGATCGCTCAAGGGTCTTAAATCCGAAGTATTGGTAGTTGAA 130269 Query 63819 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCC 63878 | || | || || | |||| | |||||||||| |||| || | | | || || Sbjct 130268 A--TCCCTGTCATAGACAATAGCAGAGTTGAGTTCTTCCTCATGTCTCATGACGCATTCG 130211 Query 63879 ATGGTGATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 63937 | || | |||| ||| || ||||| ||| |||||||| || || ||| | | | Sbjct 130210 AAAGT-TTCCTTGCTAATCATAGGAGATGCTTTGCCATTTTTTGGGTTTGTATATTGGTA 130152 Query 63938 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGC 63997 |||||| || || | ||| |||| || |||| ||||| || ||||| || || Sbjct 130151 TAAATCGCGGATAACGTGGGAGAATTGTTTCTTGGTTTGTTTGTGGAGGTTTGACACTGC 130092 Query 63998 TATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 || | || ||||||||||||||||| ||||| Sbjct 130091 AATACGAGCAGCTAGAATGGCATAATCGGGATG 130059 >seq9 Length=1448665 Score = 147 bits (162), Expect = 3e-30 Identities = 340/512 (66%), Gaps = 3/512 (1%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || || || | ||||||||||| || || || || |||| || || || Sbjct 449021 TTTTGGTAATCTCCAACTCTCTTTTCGAAAAAGTTGGTCTTGCCAGCCAAGGAAATGTTC 448962 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| || || || |||| | || || | ||| | ||||| || | Sbjct 448961 TCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCCAAAGCAACGAGG 448902 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | | ||| |||||||| || || ||| ||||| | | | ||||| || | || Sbjct 448901 AGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCCAAGAGG 448842 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 ||||||||| | || | ||||||||||| || || || || || || | | Sbjct 448841 GCGCAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACA 448782 Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312 | |||| || || || | ||| | ||| || | | ||||||||| Sbjct 448781 TCTTGGACGGCTTGTTTGGATGGGCGGTGCTTGAGATGAGAGAAAAGGAGGCATGCGAAA 448722 Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372 ||| ||| ||||| ||||| | || ||||||||||| || |||||||| | ||| Sbjct 448721 TCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATG 448662 Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432 || |||||||| || ||||| || ||||| ||||| |||||||| |||||||| || || Sbjct 448661 AGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAAGATCCAGAGAAGAAGATACCCTCA 448602 Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTT 33489 || || || || |||| || | | || | | | |||| || ||||| || Sbjct 448601 ACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGTTCTTGTCTTGAATCCATTTG 448542 Query 33490 TGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521 |||||| ||||||||||| || | ||||| Sbjct 448541 ACAGCCCAGTCGGCCTTCTTCTTAATGCAAGG 448510 Score = 82.4 bits (90), Expect = 1e-10 Identities = 189/284 (67%), Gaps = 3/284 (1%) Strand=Plus/Minus Query 33574 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 33633 || || ||||| | |||| || |||| || || |||||||| || || || || Sbjct 448404 TATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAA 448345 Query 33634 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTT 33693 |||||||| |||| || || | ||| || ||||| | |||| || |||| || Sbjct 448344 CCGTAGAAGCATCGTGCTTCTGGAATTTGAACTTCACCGCTGAATCTCTCGACCAAGTTC 448285 Query 33694 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 33753 || || || ||||| || ||||| || || || | || || || || || Sbjct 448284 TCGTTTACAATTCCATCGGATGCTGCGAAGAATGCGAGAACGTGGGAGATGAAGTAACGC 448225 Query 33754 TCGTCTGGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCC 33810 ||||| | ||| ||||||||||| | | ||| || || | ||| | ||||| Sbjct 448224 TCGTCGTCATTGAGTCTATTATTCCAATCGTGAAGATCCTTTGACAAATCAATCTCTTCT 448165 Query 33811 ACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGAT 33854 | ||||| || || ||||||||||| || ||||| | |||||| Sbjct 448164 GCGGTCCAGAAAGAGGCCTCTGCCTTCTTGTACATCTGCCAGAT 448121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944739358560