Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq36 114 1e-20 seq9 86.0 6e-12 seq1 86.0 6e-12 >seq36 Length=569963 Score = 114 bits (126), Expect = 1e-20 Identities = 417/639 (65%), Gaps = 29/639 (5%) Strand=Plus/Minus Query 148251 TCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACAC 148310 || ||| | ||||| || ||||||| || | |||||| ||| ||||| || || Sbjct 130972 TCATAACTCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAACCAGGGCAT 130913 Query 148311 TCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCTTT---ACCCTCTTCATAAACAGA 148367 || | ||||||||| | | ||||| |||| ||||| || | |||||| |||| | Sbjct 130912 TCATTGGGGCACATAAGAGTCCATT---CTCCATTCTTTTCAACACGCTTCATGAACAAA 130856 Query 148368 TCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGGCACCCA---TA 148424 ||||| |||||| |||| | | |||||||| || | || || ||| | Sbjct 130855 TCAGGAATCCACAAGGCATAGAAGAGATCGCGCGCACGAACTTCTTCCTTACCGTGGTTT 130796 Query 148425 TTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGTATACGGTC 148484 ||||| |||||| | ||| ||||| || || ||||| ||||| | ||| || | Sbjct 130795 TTGCG---TAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCA 130739 Query 148485 ATGGCGCCTTTCCTTTT---ACCTCCTTGATCGACATGGCGTAGCA-TGCTATTAAAAAC 148540 | || || | ||| ||| |||||||| |||| | | ||| || | || ||||| Sbjct 130738 AACGCACCAGGACGTTTGTTACCACCTTGATCAACATATC-TGGCAGTGTTGTTGAAAAC 130680 Query 148541 ACGCAATGCA-GGTCCCAATCCCGCCGCAGTT-CCGTTTGTGGATTCAATTTTACTATTG 148598 || | ||| || |||| || | | || ||||| || | || | | Sbjct 130679 TCGAA--GCATGGGAACAATACCATTGGAATTTCCGTTGGTACCGGCGATGTATGCACCA 130622 Query 148599 GTGGCGCGAATT---TGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATG 148655 || || || ||| ||| || || || || || || || | | || || |||||| Sbjct 130621 GTAGCACGGATTCTGTGAATG---TTGAGACCAATACCACCGGCATTCTTTGAGATCATG 130565 Query 148656 GCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGG 148715 |||||| || | || | ||||| || | |||||||||||| | |||| | ||| Sbjct 130564 GCACAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATGTCGATGAGG 130505 Query 148716 TAGCACGATGACATTTGAGGCATTTTCA-TGCCAGACGAAAATAGAGTTGGACTAGCGTG 148774 |||| ||||| | ||| || | | | | || | ||||| || ||||| ||| || Sbjct 130504 AAGCAAGATGAAAGTTG-TGCTTGTGGAGTACCCGCAGAAAAGAGTGTTGGGGAAGCATG 130446 Query 148775 AGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTTTCGATGTCATCACC 148834 || || ||| |||||| | || | ||||||||| |||||||| |||||||| Sbjct 130445 TGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACC 130386 Query 148835 ATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGG 148873 ||||| | || |||||||| | ||| |||||||| Sbjct 130385 GTGAATACCAACGGCAACACGCATGATCATTTGTTGAGG 130347 >seq9 Length=1448665 Score = 86.0 bits (94), Expect = 6e-12 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 ||| || || || | ||||| ||||| || |||||||| | | || ||||| | ||| Sbjct 449016 GTAATCTCCAACTCTCTTTTCGAAAAAGTTGGTCTTGCCAGCCAAGGAAATGTTCTCCAT 448957 Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCG 119764 || ||||| || || |||| ||| | ||||||| ||||| | | | || || Sbjct 448956 GAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCCAAAGCAACGAGGAGACG 448897 Query 119765 ATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAGCGA 119823 ||| || || ||||| ||||||| |||| || | || ||||||||||| | ||| Sbjct 448896 ATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTA-GAGTTCATGCCCAAGAGGGCGC 448838 Query 119824 CCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 || | ||| | ||| ||||| || | ||| || || || ||||| Sbjct 448837 AAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTC 448792 >seq1 Length=2965994 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || ||||| ||||||| | || | || ||| Sbjct 1570099 ATGCAAATCTTCGTTAAGACTCTCACCGGAAAGACGATCACTTTAGAGGTTGAGTCATCG 1570040 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || |||||| |||||||| || || || || |||||| Sbjct 1570039 GACACCATCGACAACGTGAAGGCTAAGATTCAAGACAAAGAGGGCATTCCCCCTGATCAA 1569980 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | | || || ||||| || |||| | | | |||||| ||| Sbjct 1569979 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGCCGCACTCTTTCCGACTACAAC 1569920 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||| ||| | ||| |||| || Sbjct 1569919 ATCCAAAAAGAATCGACTTTACATTTGGTTCT 1569888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660509283520