Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq36 360 5e-94 seq2 87.8 5e-12 >seq36 Length=569963 Score = 360 bits (398), Expect = 5e-94 Identities = 1170/1789 (65%), Gaps = 40/1789 (2%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||||| |||||| | ||| ||| || || | ||| | |||| | ||| ||| Sbjct 130284 TTCGGATTTAAGACCCTTGAGCGATCATATCTTTTACGTCTTGATGGCAAAGTTGCGGAA 130343 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || || || ||| | ||||||||||| ||||||| || | ||| | || Sbjct 130344 CGTCCTCAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGAAAGT 130403 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACAA 363568 || || |||||||| || ||| | || | ||| || || || || | |||||| Sbjct 130404 GCTATCGAAACATACAA-CTTG-ATGTCAAACAAGTACTTTACACATGCTTCCCCAACAC 130461 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | ||| || |||| | |||| | || |||||||| || | | ||||||| Sbjct 130462 TCTTTTCTGCGGGTACTCCACAAGCACAACTTTCATCTTGCTTCCTCATCGACATGAAGG 130521 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || || || ||||||| || || | |||| |||||| | || || ||||||| Sbjct 130522 AGGACAGTATTGATGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGAATG 130581 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATTCGCGG 363746 | || || |||||| | || |||| | ||||| || | || ||||| ||| Sbjct 130582 CCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGCA--TACATCGCCGG 130639 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || ||| | || ||||| | |||||||||||||| || || |||| ||||| || Sbjct 130640 TACCAACGGAAATTCCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCCAG 130699 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 || || || || ||||| || || || ||||||||| | || || ||||| Sbjct 130700 ATATGTTGATCAAGGTGGTAACAAACGTCCTGGTGCGTTTGCTGTTTACCTTGAGCCATG 130759 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 ||||||||| |||| ||||||||||| || || |||||| || || || ||| | || Sbjct 130760 GCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAAAACCACGGTAAGGAAGAAGTTCG 130819 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG--AG 363984 ||| || ||||| |||||||| | ||| || |||| || |||||||| || | | Sbjct 130820 TGCGCGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTTGAAAA 130879 Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | |||| ||| | || | ||||| | ||||| || ||| | | ||||| | Sbjct 130880 GAATG-GAGAA-TGGACTCTTATGTGCCCCAATGAATGCCCTGGTTTGGCAGATGTTTAT 130937 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || || | | ||||| ||||| | |||||| || ||||||| ||| ||||| Sbjct 130938 GGCGAGGAGTTCGAGGCTCTCTACGAGAGTTATGAAAAGGCAGGAAAGGGTCGCAAGACT 130997 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || || ||||| |||| | || | || | || | ||||| |||| || Sbjct 130998 ATCAAGGCTCAAAAGCTTTGGTACTCTATTCTTGAGGCTCAAACCGAGACCGGAAATCCT 131057 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| | ||||||||| | |||||| ||| |||||| || |||||||||| ||| Sbjct 131058 TTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTTGGTACTATT 131117 Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | |||| |||| | || || ||||| |||| ||| | || || || ||| ||| Sbjct 131118 C-GCAGCTCCAACTTGTGCACAGAGATCGTTGAGTACTCTGCACCAGATGAGGTTGCTTG 131176 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACTTTTGA 364337 |||||| | || || || || || || | || | | || || || |||| ||| Sbjct 131177 CTGTAACTTGGCTTCAATTGCTCTACCAACTTTCGTCAACATGAATGAGGGAACTTATGA 131236 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCG-ACAAGGTTATCG 364396 ||| | ||| | || || | | || | || || || | ||||| | || | Sbjct 131237 TTTCCAAAAGCTTCACGAGGTCGTCCAAGTTG-TCGTTAGAAACTTGAACAAGATCATTG 131295 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCC-GAGCGTTCTAATATGCGTCATCGCCCGATT 364455 | | || ||||||||| | | |||||| || | | ||| | ||||| || || || Sbjct 131296 ATATCAACTATTATCCAGTACAAGAAGCCAGAAAGAGC-AATTTCCGTCACCGACCTATC 131354 Query 364456 GGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCG 364515 | | ||||||| || || || ||||| | ||| || || | ||||||||||| Sbjct 131355 GCTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTCCATTTGATTCG 131414 Query 364516 CCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACT 364575 || || || || || | |||| || || || || || || || |||| Sbjct 131415 CCAGAAGCCAAGCACCTCAACATCCAGATTTTCGAGACCATTTACCACGCTGCCTTGACC 131474 Query 364576 GCTTCGTGT-GATTTGGCAAA--AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632 | || ||| || | ||||| ||| || |||| || ||| | || ||||| Sbjct 131475 TCATC-TGTCGAGATTGCAAAGGAAC--TTGGCCCGTACGAAACCTATCAAGGCTCCCCA 131531 Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692 | || |||| || |||| | ||| | ||| ||||| || |||| ||| | Sbjct 131532 GTCTCCAAGGGTGAACTCCAATATGACATGTGGGGCGTCACCCCTTCTGATTTGTGGGAT 131591 Query 364693 TGGGATACGCTACGTTCCAA--CGTTAAGAAGCATGGTACTCGCAACTCC---CTCGTTA 364747 |||| || || | ||| | | ||| | || || | |||||||||| |||||| Sbjct 131592 TGGG--ACTCTTTGAAGCAATCCATCAAGCAACACGGAATTCGCAACTCCCTTCTCGTT- 131648 Query 364748 CAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAAC 364807 || || ||||| || ||| |||| |||| |||||||| |||||| || ||||||| Sbjct 131649 --GCACCTATGCCTACTGCTAGTACTTCACAAATCCTCGGTTTCAACGAATGTTTCGAAC 131706 Query 364808 CGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867 | | ||| || | || ||||| || ||||| | |||||||| | || ||||| Sbjct 131707 CATATACTTCAAACATCTACTCACGTCGTGTTCTAGCTGGAGAATTCCAAGTTGTTAACC 131766 Query 364868 AGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATA 364927 | || |||| || ||| || || || ||| ||||| |||||||||| || Sbjct 131767 CATGGCTCCTCAAAGACCTTGTGGATATGGGTCTCTGGTCTGACAACATGAAGAACCGTA 131826 Query 364928 TCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTA 364987 |||| |||| | ||| || | || ||||| || |||||| || | || | Sbjct 131827 TCATTGCCGATGGTGGATCGATTCAAAACATCCCCAACATTCCAGCTGACATCAAAGCCC 131886 Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047 ||||||| || || ||||||||||| ||||| | || | ||||| || ||||| | Sbjct 131887 TTTACAAGACTGTTTGGGAAATTTCTCAACGAACAATTGTTCAAATGGCTGCTGATCGTG 131946 Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCA 365107 |||| |||||| ||| || || | ||| | ||||| | || || | || Sbjct 131947 GTGCATTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAATGGGCA 132006 Query 365108 AGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || | ||||| |||||||| || ||||||| ||| | ||||| || Sbjct 132007 AGATCACATCTATGCATTTTGCTGGATGGAAATTGGGTTTGAAGACCGG 132055 >seq2 Length=2942574 Score = 87.8 bits (96), Expect = 5e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 65867 GTGCGTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGAC 65926 ||| ||| || | ||| |||||||| || |||| ||| ||| || || ||||||| Sbjct 924173 GTGAGTTGCGGACCGTACCGTCATATTTAGCCATAACATCCTCAAGAGCTTTGACAAGAC 924232 Query 65927 AACGCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCC 65986 ||| || || |||||| | | ||| || || ||||||||||| | | ||||||||| | Sbjct 924233 GACGTTGAATATAACCAGTTTCTGCTGTCTTGACCGCGGTATCGATCAAACCTTCACGAC 924292 Query 65987 CGGACATTGCAGAAAAGAAAAACTCAGTCGG 66017 | | |||||| ||||| ||||| || || Sbjct 924293 CAGCCATTGCGTGGAAGAAGAACTCTGTTGG 924323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348323047112