Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq36 304 2e-77 seq9 127 3e-24 >seq36 Length=569963 Score = 304 bits (336), Expect = 2e-77 Identities = 1327/2073 (64%), Gaps = 65/2073 (3%) Strand=Plus/Minus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 || |||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 132103 GTAAATTGAATTGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 132044 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || | ||||||| |||||||||| || | ||| | ||||| || Sbjct 132043 CCCAATTTCCATCCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 131984 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 || || ||||| |||||| ||||||||| || || || | || |||||||||| | | Sbjct 131983 TGAATGTTCATTGATTGAGATTGATCGATAAATGCACCACGATCAGCAGCCATTTGAACA 131924 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 || || ||| | ||||||||||| ||| || |||| || || || |||||| | Sbjct 131923 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCTTTGATGTCAGCTGGAATG 131864 Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146 || | | || ||||| ||||||||||| || || || | ||||| || | ||| | Sbjct 131863 TTGGGGATGTTTTGAATCGATCCACCATCGGCAATGATACGGTTCTTCATGTTGTCAGAC 131804 Query 62147 CATA-----ATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62201 || | || | | | ||| || | ||||| || ||||| ||||| |||| Sbjct 131803 CAGAGACCCATATCCACAAGGT-----CTTTGAGGAGCCATGGGTTAACAACTTGGAATT 131749 Query 62202 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 62261 |||||| | || | || | ||| || || ||||| ||||| | | | || || Sbjct 131748 CTCCAGCTAGAACACGACGTGAGTAGATGTTTGAAGTATATGGTTCGAAACATTCGTTGA 131689 Query 62262 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62321 || | ||||| | ||| ||||| ||||||||||| || | | || | || Sbjct 131688 AACCGAGGATTTGTGAAGTACTAGCAGTAGGCATAGGTGCAACGAGAAGGGAGTTGCGAA 131629 Query 62322 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62381 |||| | |||| | || | || ||||||| ||| | ||| || || | Sbjct 131628 TTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGAAGGGGTGA 131569 Query 62382 CNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTA 62437 | ||| || ||| || ||||| | | ||| ||| || Sbjct 131568 CGCCCCACATGTCATATTGGAGTTCACCCTTGGAGACTGGGG----AGCCTTGATAGGTT 131513 Query 62438 TCGTATGGTCC---TTCCTTCTCAG-CTAGTTCACAACTCGCCTCTAATGCACCGTAATA 62493 ||||| || || |||||| || || | ||| | || || ||| ||| || Sbjct 131512 TCGTACGGGCCAAGTTCCTTTGCAATCTCG---ACAGATGAGGTC-AAGGCAGCGTGGTA 131457 Query 62494 AATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGCGCTTCCAGGCTATCAAATGGATAAT 62552 |||||| ||||| |||| | || || | |||| ||||| | |||||||||| | Sbjct 131456 AATGGTCTCGAAAATCTGGATGTTGAGGTGCTTG-GCTTCTGGCGAATCAAATGGAAGAC 131398 Query 62553 TTAAGAG--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 62610 ||||| || ||| || || || | ||||||||||||| | ||||||||| || | Sbjct 131397 G-AAGAGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGACG 131340 Query 62611 CTTATTAGAGATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 62669 ||| | |||| | ||||| | | |||||||| || ||||| || || || || | Sbjct 131339 GAAATT-GCTCTTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCA 131281 Query 62670 GATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCAT 62726 ||||| || | |||| ||| || || | || || | |||||| | || | ||| Sbjct 131280 AGTTTCTAACGACAACTTGGACGACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCAT 131221 Query 62727 CTATT---AC-AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62782 || || ||| || | | |||| || |||| ||||| || ||||||| Sbjct 131220 TCATGTTGACGAAAGTTGGTAGA-GCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCT 131162 Query 62783 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 62842 | | | || | | ||||| ||||| | || | || || || | || Sbjct 131161 GGTGCAGAGTACTCAACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTC 131102 Query 62843 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 62902 | ||| || ||||| ||||| || ||||| || ||||| ||||| ||| | || || || Sbjct 131101 TTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTCTCG 131042 Query 62903 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC 62962 | |||| || | ||| | | ||| | | ||||||| || || ||| | | Sbjct 131041 GTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGACCC 130985 Query 62963 TTTTCTC---TTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63017 ||| || |||| || | ||| | | | |||||||| || || |||||| Sbjct 130984 TTTCCTGCCTTTTCATAACTCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTG 130927 Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 ||| ||||| ||||||| || ||||| | | ||| ||||| | | | || || | Sbjct 130926 CCAAACCAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCAACACGCT 130867 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCG 63136 |||| || | |||||||||||| | || ||| || ||||| | | | | ||| || Sbjct 130866 TCATGAACAAATCAGGAATCCACAAGGC-ATAGAAGAGATCGCGCGCACGAACTTCTTCC 130808 Query 63137 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63196 || || || || ||||| || ||| | | || ||| | |||||| || || | | Sbjct 130807 TTACCGTGGTTTTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGG 130748 Query 63197 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63256 || | || | | ||||| |||||||| || || ||||| | ||||| || ||||| Sbjct 130747 TAAACAGCAAACGCACCAGGACGTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTG 130688 Query 63257 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAG 63316 || |||||| | ||| |||| |||||||||||| | || ||||| || | ||| || Sbjct 130687 TTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCGTTGGTACCGGCGATGTAT 130628 Query 63317 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63376 ||| | ||||| || | ||| ||||| || || || || | || ||||| Sbjct 130627 GCACCAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATC 130568 Query 63377 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 63436 | || || || || ||||| ||||| || || ||||| || ||| |||||| | Sbjct 130567 ATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATGTCGATG 130508 Query 63437 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63496 || || || || | ||| | ||| |||||| ||| | || || ||||| Sbjct 130507 AGGAAGCAAGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGTGTTGGGGAAGCA 130448 Query 63497 TGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCA 63555 || ||||| | || | || | | ||||| || || ||||| || ||||| || Sbjct 130447 TGTGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCA 130388 Query 63556 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63615 | ||||| || || || |||||||| | ||| || ||||| | ||| | | ||| Sbjct 130387 CCG-TGAATACCAACGGCAACACGCATGATCATTTGTTGAGGACGTTCCGCAACTTTGCC 130329 Query 63616 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 63673 | | || | || ||| || | || ||||| || || || | ||| |||| Sbjct 130328 ATCAAGACGTAAAAGATATGATCGCTCAAGGGTCTTAAATCCGAAGTATTGGTAGTTGAA 130269 Query 63674 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 63733 | || | || || | |||| | |||||||||| |||| || | | | || || Sbjct 130268 A--TCCCTGTCATAGACAATAGCAGAGTTGAGTTCTTCCTCATGTCTCATGACGCATTCG 130211 Query 63734 ATGGTAATACTTG-AAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 63792 | || | |||| ||| |||||| | ||| |||||||| || || ||| | | | Sbjct 130210 AAAGT-TTCCTTGCTAATCATAGGAGATGCTTTGCCATTTTTTGGGTTTGTATATTGGTA 130152 Query 63793 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 63852 |||||| || || | ||| |||| || |||| |||||| || ||||| || || Sbjct 130151 TAAATCGCGGATAACGTGGGAGAATTGTTTCTTGGTTTGTTTGTGGAGGTTTGACACTGC 130092 Query 63853 TATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 || | ||| ||||||||||||||||| ||||| Sbjct 130091 AATACGAGCAGCTAGAATGGCATAATCGGGATG 130059 >seq9 Length=1448665 Score = 127 bits (140), Expect = 3e-24 Identities = 338/514 (66%), Gaps = 7/514 (1%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| || || || | ||||||||||| || || || || | || || || || Sbjct 449021 TTTTGGTAATCTCCAACTCTCTTTTCGAAAAAGTTGGTCTTGCCAGCCAAGGAAATGTTC 448962 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 |||||||| |||||||| |||| | || || | ||| | ||||| || | Sbjct 448961 TCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCCAAAGCAACGAGG 448902 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 | | ||| ||||| || || || ||| ||||| | | | ||||| || | || Sbjct 448901 AGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCCAAGAGG 448842 Query 32550 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 32609 ||||||||| | || | ||||||||||| || || || || || || | | Sbjct 448841 GCGCAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACA 448782 Query 32610 GATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 32667 |||| || | || || || | | | | ||| || | | ||||||| Sbjct 448781 --TCTTGGACGGCTTGTTTGGATGGGCGGTGCTTGAGATGAGAGAAAAGGAGGCATGCGA 448724 Query 32668 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 32727 ||||| ||| ||||| ||||| | || | ||||||||| || |||||||| | || Sbjct 448723 AATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCA 448664 Query 32728 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 32787 | || |||||||| || ||||| || ||||| || || |||||||| ||||| || || | Sbjct 448663 TGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAAGATCCAGAGAAGAAGATACCCT 448604 Query 32788 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 32844 | || || || || |||| || | | || | | | |||| || ||||| | Sbjct 448603 CAACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGTTCTTGTCTTGAATCCATT 448544 Query 32845 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 32878 | |||||| ||||||||||| || | ||||| Sbjct 448543 TGACAGCCCAGTCGGCCTTCTTCTTAATGCAAGG 448510 Score = 87.8 bits (96), Expect = 2e-12 Identities = 190/284 (67%), Gaps = 3/284 (1%) Strand=Plus/Minus Query 32931 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 32990 ||||| || || | |||| || |||| || || |||||||| || ||||| || Sbjct 448404 TATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAA 448345 Query 32991 CCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 33050 ||||||||||||| || || | ||| || ||||| | |||| || | || || Sbjct 448344 CCGTAGAAGCATCGTGCTTCTGGAATTTGAACTTCACCGCTGAATCTCTCGACCAAGTTC 448285 Query 33051 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 33110 || || || ||||| || ||||| || || || | || || || || || Sbjct 448284 TCGTTTACAATTCCATCGGATGCTGCGAAGAATGCGAGAACGTGGGAGATGAAGTAACGC 448225 Query 33111 TCGTCTGGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCC 33167 ||||| | ||| ||||||||||| | | ||| || || | ||| | ||||| Sbjct 448224 TCGTCGTCATTGAGTCTATTATTCCAATCGTGAAGATCCTTTGACAAATCAATCTCTTCT 448165 Query 33168 ACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211 | ||||| || || ||||||||||| || ||||| | |||||| Sbjct 448164 GCGGTCCAGAAAGAGGCCTCTGCCTTCTTGTACATCTGCCAGAT 448121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629497153600