Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq9 138 1e-27 >seq9 Length=1448665 Score = 138 bits (152), Expect = 1e-27 Identities = 499/782 (64%), Gaps = 68/782 (9%) Strand=Plus/Minus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTA-GAAGACGTA 92984 |||||| || || || ||||| || ||| | | | | ||||| || | || | || | Sbjct 448896 ATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCCAAGAGGGCGCA 448837 Query 92985 CAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTA 93044 ||| ||||| ||||||||||| |||| |||||| |||||||||| | | || ||| Sbjct 448836 -AGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACATCTT 448778 Query 93045 TTACT-CTACTATTTGG-TGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTC 93102 || || | ||||| ||| || || || | | | | | ||| || || || Sbjct 448777 GGACGGCT--TGTTTGGATGGGCGGTGCTTGAGATGAGAGAAAAGGAGGCATGCGAAATC 448720 Query 93103 GGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAG 93162 ||| || | ||||||||| || || || | || ||| ||| || | || | | || Sbjct 448719 GGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAG 448660 Query 93163 TCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCAC 93222 || || ||||||||||| || || || || ||| ||||| || || ||||| || || Sbjct 448659 ACCACGCTTCTTGAGCCAGAAGATGGATGCGAAAGATCCAGAGAAGAAGATACCCTCAAC 448600 Query 93223 GGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGA-TCCATTTTA 93281 || || ||||| || | ||||| ||||| | | | || | ||| ||||||| | Sbjct 448599 AGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGTTCTTG-TCTTGAATCCATTTGA 448541 Query 93282 AAGCCCAATCGGCTTTTTTCTTAATACAAGG----------------------------- 93312 |||||| ||||| || |||||||| ||||| Sbjct 448540 CAGCCCAGTCGGCCTTCTTCTTAATGCAAGGAACTTTCAGAATTGTTAGATGATGTATTG 448481 Query 93313 --TAGTGTT----------------------TCGATAGCGTTAAATAGGTAATCTCGCTC 93348 ||||| | || |||||||| || ||||| | || | Sbjct 448480 TATAGTGGTGTAGGATTGTGACTTACTGGTGTCAATAGCGTTGAAAAGGTA-TGTCTTTT 448422 Query 93349 GTCCGAATCTCGT--ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTC 93406 || | ||| | |||||||| ||||| | ||||| || |||| || |||| || Sbjct 448421 GTGCTTG-CTCCTTGATGTATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGGATGTTT 448363 Query 93407 TCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAA 93466 ||||| |||||||| |||||||| |||| ||||| | || || ||||| Sbjct 448362 TCCATCATGATTTGGAAACCGTAGAAGCATCGTGCTTCTGGAATTTGAACTTCACCGCTG 448303 Query 93467 AATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATA 93526 |||||||| || | || || || || || |||||||||||||| || || || | | Sbjct 448302 AATCTCTCGACCAAGTTCTCGTTTACAATTCCATCGGATGCTGCGAAGAATGCGAGAACG 448243 Query 93527 TGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTTATCCCAATCGGATAGATCTTTT 93583 || || || | ||| || || || || |||| ||||||| ||||| ||| Sbjct 448242 TGGGAGATGAAGTAACGCTCGTCGTCATTGAGTCTATTATTCCAATCGTGAAGATCCTTT 448183 Query 93584 GAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCAT 93643 || | ||| | ||||| | ||||| || || || ||||| || |||||||| | ||| Sbjct 448182 GACAAATCAATCTCTTCTGCGGTCCAGAAAGAGGCCTCTGCCTTCTTGTACATCTGCCAG 448123 Query 93644 AT 93645 || Sbjct 448122 AT 448121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858600399840