Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq9 210 4e-49 >seq9 Length=1448665 Score = 210 bits (232), Expect = 4e-49 Identities = 365/517 (71%), Gaps = 13/517 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691 || ||||| ||||||||||| |||||||| |||| ||||| | || | || | | || Sbjct 448510 CCTTGCATTAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCA-AGACAAGAACTCTAC 448568 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || |||| || ||||| ||||||||||| || | || Sbjct 448569 CTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGATCTTT 448628 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 ||| |||||||||||||||||| || ||| || ||| | |||||||||||||| |||| Sbjct 448629 CGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGGCTGGACTCACCTTCTCCAACG 448687 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||||||| | | ||||| || || || | || || || |||||||| ||||| | Sbjct 448688 AACTCATCTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTTTTCTC---TC 448744 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| |||| || || || | |||| | |||| || || ||||| || | Sbjct 448745 ATCTCAAGCACCGCCCATCCAAACAAGCCGTCCAAGATGTCATTACCGAAGCCGTTGAAA 448804 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC- 42989 |||| | || ||| | || || | || || |||| | |||||||| | | || Sbjct 448805 TCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGCGCCCTCTTGGGCATGAA-CTCTACT 448863 Query 42990 CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCA 43047 |||||| |||| ||||| ||| |||||| || | |||||| || | ||||| | Sbjct 448864 CTCATGAAGCAA-TACATTGAGTTCGTCGCTGATCGTCTCCTCGTTGC-TTTGGGTAACG 448921 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 | ||||||| | | ||| |||||||| ||||||||||| || |||| |||| Sbjct 448922 ACAAAGTCTACAAGTCTGCCAACCCATTCGACTTCATGGAGAACATTTCCTTGGCTGGCA 448981 Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 |||||||||||||||| ||| | || | || ||||| Sbjct 448982 AGACCAACTTTTTCGAAAAGAGAGTTGGAGATTACCA 449018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944335469860160