Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq36 156 5e-33 seq9 134 2e-26 >seq36 Length=569963 Score = 156 bits (172), Expect = 5e-33 Identities = 911/1434 (64%), Gaps = 55/1434 (4%) Strand=Plus/Minus Query 113603 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTG 113662 |||||||| || ||||| | ||| ||||| || | |||||| || | | |||| Sbjct 132064 TAGTACATTCCGGTCTTCAAACCCAATTTCCATCCAGCAAAATGCATAGATGTGATCTTG 132005 Query 113663 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCA 113722 | ||| ||| | |||| | |||||| ||| ||||||||||| || ||| Sbjct 132004 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCA 131945 Query 113723 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 113780 ||||| || ||||| | || || || ||| | || ||||||| ||||| |||| | Sbjct 131944 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAA 131887 Query 113781 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCA 113840 || || || ||| |||| || | ||| ||||| || || ||||| | | | | Sbjct 131886 GGGCTTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATCGATCCACCATC---GGCAA 131830 Query 113841 TGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG-- 113895 ||| | | |||||| | | ||||||||||| || | || || | | ||| Sbjct 131829 TGATACGGTTCTTCATGTTGTCAGACCAGAGACCCATATCCACAAGGTCTTTGAGGAGCC 131770 Query 113896 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGGTCG 113954 ||| | | ||||| || || || || || || | | || ||||| || | | Sbjct 131769 ATGGGT--TAACAACTTGGAATTCTCCAGCTAGAACACGACGTGAG-TAGATGTTTGAAG 131713 Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014 | ||||| || || || || ||| ||| | |||||| | || || || ||||| | Sbjct 131712 TATATGGTTCGAAACATTCGTTGAAACCGAGGATTTGTGAAGTACTAGCAGTAGGCATAG 131653 Query 114015 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCC 114074 |||| | ||||||| ||| || | || | || | | ||| || ||| | | ||||| Sbjct 131652 GTGCAACGAGAAGGGAGTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCC 131593 Query 114075 AGTCGTAGT--TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 114132 | || | | || | | || |||||| ||| | ||||| ||| | ||| Sbjct 131592 AATCCCACAAATCAGAAGGGGTGACGCC--CCACATGTCATATTGGAGTTCACCCTTGGA 131535 Query 114133 GGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGG-AGCTCG 114191 | |||| || || | | | || ||||| ||||| ||| || | ||| || | Sbjct 131534 GACTGGGGAGCCTTGATAGGTTTCGTACGGGCCAAGTTCCTTTGCAATCTCGACAGATGA 131475 Query 114192 CCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGT 114251 || ||| | ||||| || || ||||| ||||| | || | |||||| || Sbjct 131474 GGTCAAGG-CAGCGTGGTAAATGGTCTCGAAAATCTGGATGTTGAGGTGCTTGGCTTCTG 131416 Query 114252 CGGAATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 114310 |||||||| | || || | || ||| |||| || |||||||| ||||| | Sbjct 131415 GCGAATCAAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACA 131357 Query 114311 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 114370 | || || || || | | ||| ||||| || | || |||||| | || || Sbjct 131356 GCGATAGGTCGGTGACGGAAATTGCTCTTTCTGGCTTCTTGTACTGGATAATAGTTGATA 131297 Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 114430 || || | | | || | ||| | |||||| | || || |||||||||| | || Sbjct 131296 TCAATGATCTTGTTCAAGTTTCTAACGACAACTTGGACGACCTCGTGAAGCTTTTGGAAA 131237 Query 114431 TCAAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTA 114487 ||| || | | ||| ||||| |||| | | || || || ||||| |||| ||| Sbjct 131236 TCATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTA 131180 Query 114488 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 114547 || || |||||| ||| |||||| | || || || ||||| || || || Sbjct 131179 CAGCAAGCAACCTCATCTGGTGCAGAGTACTCAACGATCTCTGTGCACAAGTTGGAGCTG 131120 Query 114548 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATG 114607 ||| || || | ||||||||| || ||| |||| || ||||| |||||||||||| Sbjct 131119 CGAATAGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATG 131060 Query 114608 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGG 114666 | || | || ||||| ||||| | || ||||||| | ||| | | | | | || | Sbjct 131059 AAAGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGAGCCTTG 131000 Query 114667 CACAGTGGCGTTGGCTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAA 114720 | ||| ||| || |||| ||| || || | |||||| || || || Sbjct 130999 -ATAGT---CTTG---CGACCCTTTCCTGCCTTTTCATAACTCTCGTAGAGAGCCTCGAA 130947 Query 114721 CTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATT 114779 ||| || || | |||| | || || || || || ||||| | |||| ||||| Sbjct 130946 CTCCTCGCCATAAACATCTGCCAAACCAGG-GCATTCATTGGGGCACATAAGAGTCCATT 130888 Query 114780 GACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGAT 114839 ||| || ||||||||||||||||| | || || ||||| | || ||||||||| Sbjct 130887 CTCCATTCTTTTCAACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGAT 130828 Query 114840 CCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 114899 | || ||| ||||||| | || || || || | || | ||| || | | || Sbjct 130827 CGCGCGCACGAACTTCTTCCTTACCGTGGTTTTTGCGTAGATCAAGAAACTCGAAAACAT 130768 Query 114900 CCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCT 114953 | || ||||| || || ||||| || || | || | | |||| |||| | | Sbjct 130767 CGGCATGCCATGGCTCAAGGTAAACAGCAA---ACGCACCAGGACGTTTGTTACCACCTT 130711 Query 114954 GGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCAT 115007 | | ||||| || || ||| || || || |||||||| |||| ||||||| Sbjct 130710 GATCAACATATCTGGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCAT 130657 >seq9 Length=1448665 Score = 134 bits (148), Expect = 2e-26 Identities = 119/149 (80%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||||||||| |||||||||||||||||||| || |||||| ||||| | ||||||||| Sbjct 448716 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACC 448657 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| || | || || || ||||||||||| ||||| ||| Sbjct 448656 ACGCTTCTTGAGCCAGAAGATGGATGCGAAAGATCCAGAGAAGAAGATACCCTCAACAGC 448597 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||||| |||| |||||| | |||||||| Sbjct 448596 GGCGAATGCAACGAGACGTTGAGCAAAGG 448568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351240453280