Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=2965994 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || | ||| | |||||||||||||| |||||||| || | | ||||| | || Sbjct 1569887 AAGAACCAAATGTAAAGTCGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATC 1569946 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||| ||||| || ||| | || || || || || || || ||||| || ||||| || Sbjct 1569947 CTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGGGGAATGCCCTCTTTGTC 1570006 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| || || | || || | || || |||| ||| | || Sbjct 1570007 TTGAATCTTAGCCTTCACGTTGTCGATGGTGTCCGATGACTCAACCTCTAAAGTGATCGT 1570066 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| ||||| | ||| || ||||| |||||||| Sbjct 1570067 CTTTCCGGTGAGAGTCTTAACGAAGATTTGCAT 1570099 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| || || | || | || || || || |||||||||||||| | Sbjct 1570100 ACCACCACGAAGTCTGAGAACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCGGA 1570159 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||| || | || ||||| ||||| ||||| |||| | || || |||||||| || Sbjct 1570160 GAGGGTTCGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGTTGTTGGTCGGGGGG 1570219 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||| || || ||||| || || ||| ||| || | || || | || || || Sbjct 1570220 AATTCCCTCCTTATCTTGGATCTTGGCCTTGACATTGTCGATAGTGTCGCTGGACTCGAC 1570279 Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419 || | || | |||||| ||||| Sbjct 1570280 CTCAAGGGTGATGGTCTTTCCGGT 1570303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642826403040