Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq36 91.5 1e-13 >seq36 Length=569963 Score = 91.5 bits (100), Expect = 1e-13 Identities = 248/380 (65%), Gaps = 0/380 (0%) Strand=Plus/Plus Query 94003 TGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCC 94062 ||||| | |||||||| | || || || || || ||| | ||| | ||||| Sbjct 130560 TGTGCCATGATCTCAAAGAATGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCT 130619 Query 94063 AGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGG 94122 | ||| | |||||| ||||||||| || | ||||| || | || || ||||| || Sbjct 130620 ACTGGTGCATACATCGCCGGTACCAACGGAAATTCCAATGGTATTGTTCCCATGCTTCGA 130679 Query 94123 GTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTC 94182 || ||||||||| | || | || || || || |||||| | | ||| | || Sbjct 130680 GTTTTCAACAACACTGCCAGATATGTTGATCAAGGTGGTAACAAACGTCCTGGTGCGTTT 130739 Query 94183 GCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAAC 94242 || || || || ||||| ||||| || || || | || | || || || || ||| Sbjct 130740 GCTGTTTACCTTGAGCCATGGCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAAAAC 130799 Query 94243 CACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTT 94302 ||||| || || | | || | || |||||||| || | ||| | || || | Sbjct 130800 CACGGTAAGGAAGAAGTTCGTGCGCGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTG 130859 Query 94303 TTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCC 94362 || ||||| || || || || || | |||| |||| | || ||||||||||| || Sbjct 130860 TTCATGAAGCGTGTTGAAAAGAATGGAGAATGGACTCTTATGTGCCCCAATGAATGCCCT 130919 Query 94363 GGACTGTCCGACGTTTGTGG 94382 || || | || |||| ||| Sbjct 130920 GGTTTGGCAGATGTTTATGG 130939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721245843360