Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4 122 1e-22 seq1 84.2 2e-11 >seq4 Length=2737121 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||||||||| || ||||| | || ||||| ||||| |||||||| Sbjct 1682929 CTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAA 1682988 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||| ||||||| || | | ||||||||| |||||| |||| | Sbjct 1682989 GATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCTTTGACATT 1683048 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | ||||| ||||||||||| || || || || Sbjct 1683049 GTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGTTTTGCCCGTGAGGGTCTTGAC 1683108 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 1683109 GAAGATCTGCAT 1683120 >seq1 Length=2965994 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||||| || || | | ||| | ||||| ||||| || || |||||||| || ||||| Sbjct 1569638 TTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTA 1569697 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || | ||||| | | || || | |||||| |||||||| ||||| || || || || Sbjct 1569698 ATCCAAAAGAGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAATCGTTGTTGATC 1569757 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539 | || | | |||||| || ||||| ||| | | | | || || || Sbjct 1569758 AGGTGGAATACCCTCCTTATCTTGAATCTTGGCCTTAACATTATCAATAGTATCTGAAGA 1569817 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || | |||||||| || || |||| || || |||||||||||||| Sbjct 1569818 TTCTACCTCTAATGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1569871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236167308320