Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-20 seq1 98.7 8e-15 >seq2 Length=2942574 Score = 116 bits (128), Expect = 3e-20 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| || |||||| | | ||||||||||||||||| |||||||| | ||||| ||| Sbjct 925766 GGTAAGGAGGGTCGTCTCCGTGGAAATTTGATGGGAAAGCGTGTCGACTTTTCTGCTCGT 925707 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || ||||||||| |||||||||| || | || |||| || || ||||||| | ||| Sbjct 925706 ACTGTTATTACTGGTGATCCCAATCTTTCCCTAGATGAGGTCGGAGTTCCTCGAAGCATT 925647 Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTTGACTCAA 669034 || | || ||| || | | || | || ||| | ||||| || | ||| ||| Sbjct 925646 GCGAGAATTCTCACATATCCGGAGACCGTCACACCCCTAAATATCGATAAATTGCATCAG 925587 Query 669035 TTAGTGAAAAATGGT--AAAAGAGTATATCCGGGTGCCAATTTTGTAATC 669082 | || ||||||||| | | ||| |||| |||||||| | ||| ||| Sbjct 925586 CTTGTCAAAAATGGTCCAGATGAG--CATCCTGGTGCCAAATATGTCATC 925539 >seq1 Length=2965994 Score = 98.7 bits (108), Expect = 8e-15 Identities = 246/369 (67%), Gaps = 5/369 (1%) Strand=Plus/Plus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || || |||||||| | ||| || || || ||||||||||| || || | | |||||| Sbjct 1664476 ATTCCGTTGGCATCAAGATCGAAAGTAACCTCAATTTGAGGAACACCACGTGGTGCAGGT 1664535 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | ||| | |||| || || || || ||| || ||||| Sbjct 1664536 GGGATACCAGTGAGCTCGAATTTACCCAAGAGGTTGTTGTCCTTGGTGCGTTGACGTTCG 1664595 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATA-CTCT 517452 |||||||| | |||||| ||| ||| ||| || || || | || | || | |||| Sbjct 1664596 CCCTCGAAGACTTGGATGAGAACACCAGGTTGGTTGTCGGAGAAGGTAGAGAAGACCTCT 1664655 Query 517453 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 || || || || || || |||||||| ||| | |||||||| ||||| || Sbjct 1664656 -GACTTCTTGGTTGGGATGGTGGTGTTTCTTGGAATGAGCTTGGTCATTTGTCCACCAGC 1664714 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 517570 || || | ||| ||||| | || | ||||| | |||| || | || | | || Sbjct 1664715 AGTCTCGATACCGAGAGACAATGGGGCAACATCGAGGAGGAGGATCTCGTTAGTGGACTT 1664774 Query 517571 TCAT-CAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 517629 || ||| | ||| ||||| || || || | |||||||| ||||||||||| || Sbjct 1664775 GGATGAAGTGTCACCGGAGAGAATGGCAGCCTGGACGGCAGCACCGTATGCAACAGCCTC 1664834 Query 517630 ATCAGGATT 517638 |||||| || Sbjct 1664835 ATCAGGGTT 1664843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780806719039096