Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 291 1e-73 seq15 167 3e-36 seq25 158 2e-33 seq36 136 5e-27 seq58 113 6e-20 >seq1 Length=2965994 Score = 291 bits (322), Expect = 1e-73 Identities = 515/744 (69%), Gaps = 14/744 (2%) Strand=Plus/Plus Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGA---AGTGTCGAAGGAGTCTCGAATCGAAA 7462 ||||| ||||| ||||| || |||||||| |||| || || | ||||| Sbjct 1665735 TTCTTGTGTTTTCGTTTGAA---TTCAGAGACAAAGTGGTTAACAAGACGGTTGTCGAAG 1665791 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || |||||||||||||| || || || ||||| | ||||| || |||||||| ||||| Sbjct 1665792 TCCTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCCTCTTCA 1665851 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | || | |||||||| || || || ||||| || || || ||||| ||||| Sbjct 1665852 ATGGTCAAGAGAGAAACATCGAAAGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGC 1665911 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 || | || | ||||| || | |||||| || || || || || || ||||| || || Sbjct 1665912 TCACCCTCAATCTTCTTGTCCAAACCGTAAGCAATGGCAGCTGCGGTAGGTTCGTTGATG 1665971 Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 ||||| ||| ||| ||||||||||| | || || || || ||||| ||||| ||| Sbjct 1665972 ATACGGAGAACGTTGAGGCCAGCAATGAGACCAGCGTCCTTGGTAGCTTGACGTTGTGAA 1666031 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC-TTTCTTACCGAGATACGA 7761 ||| | ||||| || ||||| || ||||| |||| |||| ||| | || || || | Sbjct 1666032 TCGGTGAAGTAAGCTGGGACTGTGACGACGGCGTTGTTGACAGTTCCT-CCAAGGTAAGC 1666090 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || || | ||| |||| ||| | | ||| || ||||| ||||| | | || || Sbjct 1666091 CTCAGCTGTCTCTCTCATCTTGACCAAGATCATAGAAGAAATTTCTTCTGGTGTGAATTG 1666150 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881 || || || || || || ||||| || || | || || |||| |||| | || || Sbjct 1666151 CTTAGTCTCGCCCTTGAACTCAACCTCGATAACTGGCTT-TCCG--GCACGGTCAATGAC 1666207 Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941 ||| | | | | ||||||||| ||||||||| | || | ||||| | || || Sbjct 1666208 CTTGAAAGGGAAGTGCTTCATATCGGCTTGGACCTCTGCATCTGCGAACTTGCGACCAAT 1666267 Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001 |||||||| ||||| || || ||||| | ||||||||||| ||||||||| || || Sbjct 1666268 CAGACGCTTAGCATCGAAGACAGTGTTGATTGGGTTCATGGCGACTTGGTTCTTGGCGGC 1666327 Query 8002 GTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATT 8061 || ||||| | ||| || || || || || || ||| | || || || || || || Sbjct 1666328 ATCTCCGATCAAACGCTCGGTA---TCTGTGAAGGCAACGAAGGAAGGTGTGGTACGGTT 1666384 Query 8062 CCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATA 8121 |||||||| || || |||||||| | | || | | ||| || || || || || Sbjct 1666385 TCCTTGGTCATTGGCGATAATTTCGATTCTATCATCACGGAAGATACCCACACAGGAGTA 1666444 Query 8122 CGTTGTTCCTAAATCAATACCGAT 8145 || || || ||||| ||||| || Sbjct 1666445 TGTGGTACCCAAATCGATACCAAT 1666468 Score = 104 bits (114), Expect = 3e-17 Identities = 274/414 (66%), Gaps = 17/414 (4%) Strand=Plus/Plus Query 11281 TCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACCT 11340 ||||| | ||| || || | | || | ||| |||| ||| | ||| || || | Sbjct 328289 TCAAAACGACCAGGCCGCATAAGAGCCTTGTCAAGTACGTCGGGTCTGTTGGTACCAGCA 328348 Query 11341 ATAACAACAATTTCAGTTTCATTC---TCGAAACCATCCATTTCTGTTAATAATTGGTTA 11397 | ||||||||||| ||| || | |||||||||||| || ||||| | ||| || Sbjct 328349 AGAACAACAATTTGC---TCAGTCGTGTTGAAACCATCCATCTCAGTTAAAATTTGATTG 328405 Query 11398 ATTGTTTGTTCACGCTCATCGTTTGC-----CGCAAACCCATTCATACTT----CTTTTC 11448 | ||| || || ||||||||| | || | | | || | || | | Sbjct 328406 AGTGTAGCCTCCCGTTCATCGTTTCCACCTCCGGAGAATCCGCCAGATTTGCCACGGGAC 328465 Query 11449 TTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT 11508 || ||||| ||||| || ||||| || || || ||||| || | ||| | ||||| Sbjct 328466 TTTCCAATAGCATCGATCTCATCAATGAATATGATACATGGAGTACTTTTTCTTGCCATG 328525 Query 11509 TCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGAC 11568 | || | || |||||||| ||| || || || || ||||| || |||||| || Sbjct 328526 GCGAAGAGGTCCCGGACTCTCGATGCTCCAACACCAACGAACATCTCCACGAACTCGGAA 328585 Query 11569 CC-CGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGT 11627 || | ||||| || || || || ||||||||| ||| | || ||||| | ||| Sbjct 328586 CCACTGACACTAAAGAAT-GGTACTTGAGATTCACCAGCTGTTGCCTTTGCTAGTAATGT 328644 Query 11628 TTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 |||||| ||||||||| ||| | ||| | ||||| | || ||||||||||| Sbjct 328645 TTTACCAGTACCTGGTGGACCAGATAAAATAGCACCACGAGGAATTTTAGCACC 328698 >seq15 Length=1132830 Score = 167 bits (184), Expect = 3e-36 Identities = 484/739 (65%), Gaps = 21/739 (3%) Strand=Plus/Plus Query 7026 CGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAG-T 7084 ||||||| || | || ||||| || || |||||||| ||||| || | || | || | Sbjct 1048830 CGGCTTGAACAGCGGCACCGTAAGCAACGGCCTCATCAGGGTTGATGCTCTTCTCCAACT 1048889 Query 7085 TCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCA 7144 ||||| |||| ||| | || || | | ||| ||| | ||||| || || || ||| Sbjct 1048890 TCTTT-CCGTCAAAGAACTCGCTCAAGAGCTTTTGGATTCTTGGGATACGGGTAGAACCA 1048948 Query 7145 CCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTT 7204 ||||| | ||||| || | || || ||||| || || | || || | Sbjct 1048949 CCGACAAGGACGATCTCGTCAACCTTGCTCTTATCAATGTTGGCATCCTTGAGAACCTGA 1049008 Query 7205 TCGACAGGTTCCATACATTTACGGAACAAGTCCATACAC---AGTTCCTCAAAACGTGCA 7261 | ||||| |||| | ||| | ||| || | | || ||||| || | ||| Sbjct 1049009 GCAACAGGCTCCAAAG---TACCGCTGAAGGCCTTTGAGTTAAGGTCCTCGAATCTGGCA 1049065 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||| || | || ||| || | || ||| | || || ||||| |||| | | || Sbjct 1049066 CGGGTGATTTGAGCATTGAAGTCCTCACCATCGAACAAGGAGTCAATCTCAACGTTGGTG 1049125 Query 7322 TGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379 || ||| | ||| |||| ||| || ||||| || || |||| | ||| || | Sbjct 1049126 GAAGCACCGTTGGAGAGG--GTTCTCTTAGCACGCTCGCAAGCAGTTCTGAGACGGCGGA 1049183 Query 7380 GGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT 7439 ||||||| |||| ||| || || |||||| || | | ||||| | ||||| Sbjct 1049184 GGGCACGGGGGTCGTTGGACATGTCCTTCTTAGTCTTTCTGGTGAACTCCTTCTTGAAGT 1049243 Query 7440 GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTT 7499 | ||| | | | ||||||||||| ||| ||||| || || || || ||||| || | Sbjct 1049244 GCTCAAGCAAGTTGGTATCGAAATCTTGACCTCCCAAATGGGTGTCACCGGCGGTAGCCT 1049303 Query 7500 TGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCA 7559 |||| |||| ||| |||| ||||| | | |||||||| || || |||||||| | Sbjct 1049304 TGACAGTGAAGACACCACCTTGGATGTTAAGGAGGGAAACATCGAAAGTTCCACCACCGA 1049363 Query 7560 GGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT------ATCGAGACCGTACG 7613 | || | ||||| |||| || || | ||| ||| | | |||||||| | Sbjct 1049364 GATCGTAGATGAGAACGT---TACGCTCCTTGTTGGACTTTCCAGCACCAAGACCGTAAG 1049420 Query 7614 CGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG 7673 | || || || || || || || || || ||||| ||| ||| || || || |||| Sbjct 1049421 CAATGGCAGCAGCGGTAGGCTCGTTGATGATACGGAGAACGTTAAGACCGGCGATAGCAC 1049480 Query 7674 CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCG 7733 | ||||| || || ||||| ||||| ||||| ||||| || ||||| || | ||| | Sbjct 1049481 CAGCATCCTTGGTAGCTTGACGTTGGTTGTCGTTGAAGTAAGCTGGGACAGTGATGACGG 1049540 Query 7734 CGTCCGTGACTTTCTTACC 7752 | | | ||| ||||| || Sbjct 1049541 CCTTTGAGACCTTCTTGCC 1049559 >seq25 Length=821810 Score = 158 bits (174), Expect = 2e-33 Identities = 253/361 (70%), Gaps = 13/361 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||| || |||||||| || || || || || | |||||||||| ||| Sbjct 660716 ATCGAAATCTTCTCCTCCCAAGTGAGTGTCACCGGCAGTAGAAAGAACTTCAAAGACACC 660775 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCA---AAAATGAG 7572 | |||||| | | |||||||| || || || ||||| || ||| | ||||| Sbjct 660776 ACGGTCAATGGAGAGAAGGGAAACATCGAAAGTTCCTCCACCGAGATCATAGACAATGAT 660835 Query 7573 T--ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630 | |||||| | | || |||| || | |||||| || ||||| || || || Sbjct 660836 TTGACGTTC--ACCCTC------AGTCTTGTCCAAACCGTAAGCAATAGCTGCGGCGGTA 660887 Query 7631 GGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT 7690 |||||||| | |||||||| ||||| || ||||| | | ||||| || || ||| Sbjct 660888 GGTTCATTGACGATACGAAGGACGTTCAAACCGGCAATGATACCGGCATCCTTAGTGGCT 660947 Query 7691 TGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA 7750 |||| ||| ||||| |||||||| || || || || || |||| ||||| |||| Sbjct 660948 TGTCTTTGGTTGTCGTTGAAGTAGGCTGGAACAGTAACAACTGCGTGGGTGACAGTCTTT 661007 Query 7751 CCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCA 7810 ||||| || ||||| |||| || ||||| || |||| ||| | |||||||| ||| Sbjct 661008 CCGAGGTAAGATTCAGCGACTTCCTTCATCTTTCCGAGAATCATGGCGGAAATCTCCTCA 661067 Query 7811 G 7811 | Sbjct 661068 G 661068 >seq36 Length=569963 Score = 136 bits (150), Expect = 5e-27 Identities = 514/803 (64%), Gaps = 29/803 (4%) Strand=Plus/Minus Query 105284 ACTCCAGAATTTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCG 105343 |||| | || ||||| ||||| || || ||| ||||||| || || ||||| Sbjct 131151 ACTCAACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGC 131092 Query 105344 ACTTTTCATTACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATT 105403 ||| | || || || |||||||||||||| | || |||| || || |||| | | Sbjct 131091 TCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCT 131032 Query 105404 TAATAATTGCTTTCCAAATCTCCGAAGCTGGTACAACTT--TAGT--TGCGA----TACC 105455 || ||| | | ||||| || ||| ||| |||| ||||| | || Sbjct 131031 CAAGAATAGAGTACCAAAGCTTTTGAGC--------CTTGATAGTCTTGCGACCCTTTCC 130980 Query 105456 TTCAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACC 105515 | | ||| || ||||||| ||| | || ||||| | || || || |||| | ||| Sbjct 130979 TGCCTTTTCATAACTCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAACC 130920 Query 105516 CTTTGCCTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAA 105575 | || || || | | | ||| | |||| |||||| || |||||||| Sbjct 130919 AGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCAACACGCTTCATGAA 130860 Query 105576 CAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTG 105635 |||||| |||||||||| ||| | ||||| || || | | ||||| | ||| || Sbjct 130859 CAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGCGCACGAACTTCTTCCTTACCGTG 130800 Query 105636 ATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGC 105695 || || | || ||||| |||| || |||||| |||||||| || | || || || Sbjct 130799 GTTTTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGC 130740 Query 105696 AATAGACCCTTTACGACG------CCCCGCTTGATTGACATATCTTGCGGTTGAGTTATA 105749 || || | | |||| || |||||| |||||||| || || ||| | Sbjct 130739 AA---ACGCACCAGGACGTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAA 130683 Query 105750 CACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTT 105809 ||||| | ||| |||| |||||||| ||| |||| || || || || | || Sbjct 130682 AACTCGAAGCATGGGAACAATACCATTGGAATTTCCGTTGGTACCGGCGATGTATGCACC 130623 Query 105810 ATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGC 105869 | | ||||| | ||||| || | |||||||| || || ||| ||| || Sbjct 130622 AGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGC 130563 Query 105870 ACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAA 105929 ||| || | |||||||| ||||| || ||||| || ||||| | | || ||||| Sbjct 130562 ACAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAA 130503 Query 105930 ACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAAT 105989 || ||||| | ||||| | || ||||| ||| || || ||||| | ||||| | Sbjct 130502 GCAAGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGTGTTGGGGAAGCATGTGT 130443 Query 105990 GAACAAACCTTTCGATAACGCTTCGTATGTTTC--CAGGACGTGATCAATATCGTGTCCA 106047 || | || || | | | ||||||||| || || | || ||||| | || Sbjct 130442 AAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTT--TCGATATCATCACCG 130385 Query 106048 TGAATACCAATAGCGACGCGCAT 106070 |||||||||| || || ||||| Sbjct 130384 TGAATACCAACGGCAACACGCAT 130362 >seq58 Length=269280 Score = 113 bits (124), Expect = 6e-20 Identities = 198/285 (69%), Gaps = 14/285 (5%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||||||||| |||||||| || || || || | ||||||||| |||| ||| Sbjct 101025 ATCGAAATCTTCACCTCCCAAGTGAGTGTCTCCGTTAGTGGATTTGACTTCGAAGACACC 100966 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC--AAAAATGAGT 7573 || ||| | | | || | ||| || ||||| ||||||| || | | | | | Sbjct 100965 CTTTTGAATCTCGAGGACGGAGATATCGAAAGTACCTCCACCCAAATCGTAGACAGCAAT 100906 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | ||| | ||| | || ||| || | |||||| |||| ||| || |||||||| Sbjct 100905 A-------ATC-TTGTCCTCGTCCTTCTCCAAACCGTAAGCGAGAGCGGCAGCCGTTGGC 100854 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691 || || | | | ||| ||||| || ||||| ||| | ||||| || || |||| Sbjct 100853 TCGTTGACGACTCTGAGAACGTTCAAACCTGCAAT--TTGACCAGCATCCTTGGTGGCTT 100796 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 | ||||| |||||||| ||||| || || || || ||||| |||| Sbjct 100795 GACGTTGGGAATCGTTGAAGTAAGCGGGAACGGTAACGACAGCGT 100751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130291225440